Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC091805.2-201ENST00000603848 235 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.3□□□□□ -2.04
SCN1BQ07699 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SCN1BQ07699 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.3□□□□□ -2.04
SCN1BQ07699 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SCN1BQ07699 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.29□□□□□ -2.04
SCN1BQ07699 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 RNU6-428P-201ENST00000362942 107 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 RNU6-336P-201ENST00000364891 107 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN1BQ07699 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SCN1BQ07699 Y_RNA.399-201ENST00000383955 105 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 MIR144-201ENST00000384886 86 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.29□□□□□ -2.04
SCN1BQ07699 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.29□□□□□ -2.04
SCN1BQ07699 MTND2P22-201ENST00000444325 1033 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 RNU7-180P-201ENST00000459240 63 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 AL163973.1-201ENST00000484753 577 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 AC097462.2-201ENST00000504623 481 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.29□□□□□ -2.04
SCN1BQ07699 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 RNU6-667P-201ENST00000517186 102 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 AC109479.2-201ENST00000517842 174 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 AP000763.2-201ENST00000540641 163 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.29□□□□□ -2.04
SCN1BQ07699 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN1BQ07699 AC009063.1-201ENST00000563342 702 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 MIR4325-201ENST00000583049 90 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.29□□□□□ -2.04
SCN1BQ07699 AL031274.2-201ENST00000599419 203 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 AC025165.5-201ENST00000602802 578 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 AC107304.1-201ENST00000604229 296 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 APOOP1-201ENST00000604695 592 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 U2.17-201ENST00000611454 95 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 uc_338.34-201ENST00000617467 174 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.29□□□□□ -2.04
SCN1BQ07699 AL137790.1-201ENST00000634283 177 ntBASIC2.29□□□□□ -2.04
SCN1BQ07699 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
SCN1BQ07699 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
SCN1BQ07699 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.29□□□□□ -2.04
SCN1BQ07699 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
SCN1BQ07699 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SCN1BQ07699 RNU6-944P-201ENST00000364023 107 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 SNORA16B-201ENST00000364674 135 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 RNU6-1042P-201ENST00000384204 107 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 SNORA48.5-201ENST00000391143 135 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 AL138827.1-201ENST00000402666 306 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 RNU2-32P-201ENST00000411193 191 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 RNU6-293P-201ENST00000411259 106 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 AL606489.2-201ENST00000433886 234 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN1BQ07699 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.28□□□□□ -2.04
SCN1BQ07699 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN1BQ07699 RNU7-167P-201ENST00000459160 62 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 SNRPGP7-201ENST00000469016 106 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 RPL30P1-201ENST00000488676 339 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 MTND2P33-201ENST00000506452 1031 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 AC107222.1-201ENST00000510899 637 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.28□□□□□ -2.04
SCN1BQ07699 SNORA31.25-201ENST00000517242 134 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 AC107953.1-201ENST00000522216 297 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN1BQ07699 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN1BQ07699 MYL12BP1-201ENST00000569826 507 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN1BQ07699 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN1BQ07699 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN1BQ07699 NBR2-204ENST00000587322 63 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN1BQ07699 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SCN1BQ07699 AC004908.3-201ENST00000610248 625 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 AC104073.3-201ENST00000610942 955 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 MIR6895-201ENST00000613497 78 ntBASIC2.28□□□□□ -2.04
SCN1BQ07699 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SCN1BQ07699 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN1BQ07699 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN1BQ07699 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SCN1BQ07699 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
SCN1BQ07699 AC005336.3-201ENST00000623833 2679 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 RNU6-525P-201ENST00000363685 104 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 RNA5SP387-201ENST00000364226 106 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 RNU6-1222P-201ENST00000384615 107 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 AL606923.1-201ENST00000406616 190 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 AL663109.1-201ENST00000411498 844 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 USP9YP27-201ENST00000418455 438 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 AL139132.1-201ENST00000431587 344 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.27□□□□□ -2.05
SCN1BQ07699 AC243964.1-201ENST00000441814 261 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN1BQ07699 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN1BQ07699 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN1BQ07699 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN1BQ07699 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN1BQ07699 RNU6-405P-201ENST00000516637 110 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 RN7SKP256-201ENST00000517201 314 ntBASIC2.27□□□□□ -2.05
SCN1BQ07699 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN1BQ07699 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.27□□□□□ -2.05
SCN1BQ07699 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.27□□□□□ -2.05
SCN1BQ07699 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms