Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 RNU6-1037P-201ENST00000459571 107 ntBASIC3.22□□□□□ -1.89
E2F1Q01094 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.22□□□□□ -1.89
E2F1Q01094 PTP4A1P4-201ENST00000512479 322 ntBASIC3.22□□□□□ -1.89
E2F1Q01094 RNA5SP384-201ENST00000516615 116 ntBASIC3.22□□□□□ -1.89
E2F1Q01094 RNU6-1183P-201ENST00000517054 60 ntBASIC3.22□□□□□ -1.89
E2F1Q01094 AP002404.1-201ENST00000532005 451 ntBASIC3.22□□□□□ -1.89
E2F1Q01094 SYF2P1-201ENST00000550658 413 ntBASIC3.22□□□□□ -1.89
E2F1Q01094 MIR4782-201ENST00000577987 79 ntBASIC3.22□□□□□ -1.89
E2F1Q01094 CPDP1-201ENST00000579660 283 ntBASIC3.22□□□□□ -1.89
E2F1Q01094 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.22□□□□□ -1.89
E2F1Q01094 AC040896.1-201ENST00000613819 479 ntBASIC3.22□□□□□ -1.89
E2F1Q01094 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.22□□□□□ -1.89
E2F1Q01094 AC006386.2-201ENST00000624491 75 ntBASIC3.22□□□□□ -1.89
E2F1Q01094 AC012005.1-201ENST00000624575 75 ntBASIC3.22□□□□□ -1.89
E2F1Q01094 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.22□□□□□ -1.89
E2F1Q01094 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
E2F1Q01094 CUL1P1-201ENST00000509510 2425 ntBASIC3.22□□□□□ -1.89
E2F1Q01094 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
E2F1Q01094 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.22□□□□□ -1.89
E2F1Q01094 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.22□□□□□ -1.89
E2F1Q01094 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
E2F1Q01094 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.21□□□□□ -1.89
E2F1Q01094 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
E2F1Q01094 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
E2F1Q01094 MIR30E-201ENST00000362104 92 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 RNU6-596P-201ENST00000365395 98 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 RNU6-827P-201ENST00000365553 106 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 Y_RNA.422-201ENST00000384054 114 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 RNU6-72P-201ENST00000384285 79 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 RNU6-1035P-201ENST00000384477 107 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 MIR606-201ENST00000384851 96 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 MIR591-201ENST00000385290 95 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 MIR888-201ENST00000401186 77 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 AL591034.1-201ENST00000407447 340 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 MIR1289-1-201ENST00000408836 144 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.21□□□□□ -1.9
E2F1Q01094 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.21□□□□□ -1.9
E2F1Q01094 HMGN2P30-201ENST00000423237 256 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.21□□□□□ -1.9
E2F1Q01094 AC013470.1-201ENST00000453438 462 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 RNA5SP310-201ENST00000459084 116 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.21□□□□□ -1.9
E2F1Q01094 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.21□□□□□ -1.9
E2F1Q01094 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.21□□□□□ -1.9
E2F1Q01094 AC097462.2-201ENST00000504623 481 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.21□□□□□ -1.9
E2F1Q01094 RPL23AP94-201ENST00000512518 302 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 RNU6-327P-201ENST00000516270 127 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 SCARNA16.2-201ENST00000516520 172 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 Y_RNA.687-201ENST00000516558 91 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 AC109479.2-201ENST00000517842 174 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.21□□□□□ -1.9
E2F1Q01094 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.21□□□□□ -1.9
E2F1Q01094 AC026333.2-201ENST00000542164 106 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 TGIF1P1-201ENST00000558095 802 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 AC006504.6-201ENST00000590142 199 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 AC016925.2-201ENST00000605108 242 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 AC093732.2-201ENST00000607950 274 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 AC011890.2-201ENST00000613393 294 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 MTND5P30-201ENST00000452896 1731 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
E2F1Q01094 AC002546.1-201ENST00000588041 2504 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 AC068647.1-201ENST00000489539 2265 ntBASIC3.21□□□□□ -1.9
E2F1Q01094 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
E2F1Q01094 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
E2F1Q01094 Y_RNA.2-201ENST00000362330 96 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 Y_RNA.28-201ENST00000362554 111 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 RNA5SP295-201ENST00000362655 121 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 RNU6-270P-201ENST00000364131 105 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 RNU1-73P-201ENST00000383971 164 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 Y_RNA.463-201ENST00000384271 102 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 RNU6-738P-201ENST00000384531 106 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 RNU6-1160P-201ENST00000384546 104 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 RNU6-331P-201ENST00000384724 107 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 RNU6-1106P-201ENST00000390845 107 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 RNU6-174P-201ENST00000410406 106 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 RNA5SP31-201ENST00000411144 127 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 AC018865.2-201ENST00000423631 129 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 RPS15AP10-201ENST00000432472 382 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.2□□□□□ -1.9
E2F1Q01094 AL357552.1-201ENST00000445254 415 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
E2F1Q01094 NIPA2P5-201ENST00000452282 464 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 RPL23AP67-201ENST00000465341 474 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 AC006445.1-201ENST00000491925 405 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.2□□□□□ -1.9
E2F1Q01094 RNU6-1045P-201ENST00000516321 107 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 SNORA70.19-201ENST00000516717 90 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 AC022080.3-201ENST00000544433 482 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.2□□□□□ -1.9
E2F1Q01094 AC109446.1-201ENST00000566172 220 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 AC009314.1-201ENST00000603871 304 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 AL355802.3-201ENST00000607571 545 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.2□□□□□ -1.9
E2F1Q01094 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
E2F1Q01094 SCARNA4-202ENST00000625402 129 ntBASIC3.2□□□□□ -1.9
E2F1Q01094 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
E2F1Q01094 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms