Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 RNU5F-8P-201ENST00000515941 111 ntBASIC2.55□□□□□ -2
IRX4P78413 RNU6-581P-201ENST00000516214 105 ntBASIC2.55□□□□□ -2
IRX4P78413 AC025755.1-201ENST00000521306 278 ntBASIC2.55□□□□□ -2
IRX4P78413 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.55□□□□□ -2
IRX4P78413 FO082796.1-201ENST00000523795 183 ntBASIC2.55□□□□□ -2
IRX4P78413 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.55□□□□□ -2
IRX4P78413 MIR5583-1-201ENST00000580941 59 ntBASIC2.55□□□□□ -2
IRX4P78413 MIR548AC-201ENST00000585049 88 ntBASIC2.55□□□□□ -2
IRX4P78413 AL162413.1-201ENST00000603198 110 ntBASIC2.55□□□□□ -2
IRX4P78413 AL355598.1-201ENST00000604169 202 ntBASIC2.55□□□□□ -2
IRX4P78413 AL049779.4-201ENST00000604500 156 ntBASIC2.55□□□□□ -2
IRX4P78413 uc_338.11-201ENST00000619132 160 ntBASIC2.55□□□□□ -2
IRX4P78413 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.55□□□□□ -2
IRX4P78413 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.55□□□□□ -2
IRX4P78413 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.55□□□□□ -2
IRX4P78413 MIR3688-2-201ENST00000636963 87 ntBASIC2.55□□□□□ -2
IRX4P78413 MIR1321-201ENST00000637766 79 ntBASIC2.55□□□□□ -2
IRX4P78413 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.55□□□□□ -2
IRX4P78413 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
IRX4P78413 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
IRX4P78413 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.54□□□□□ -2
IRX4P78413 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.54□□□□□ -2
IRX4P78413 Y_RNA.33-201ENST00000362591 102 ntBASIC2.54□□□□□ -2
IRX4P78413 Y_RNA.256-201ENST00000364594 104 ntBASIC2.54□□□□□ -2
IRX4P78413 RNU6-395P-201ENST00000365662 106 ntBASIC2.54□□□□□ -2
IRX4P78413 BTF3P7-201ENST00000407097 488 ntBASIC2.54□□□□□ -2
IRX4P78413 RN7SKP223-201ENST00000410582 62 ntBASIC2.54□□□□□ -2
IRX4P78413 AL135786.1-201ENST00000415892 214 ntBASIC2.54□□□□□ -2
IRX4P78413 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.54□□□□□ -2
IRX4P78413 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.54□□□□□ -2
IRX4P78413 AL591806.2-201ENST00000433122 173 ntBASIC2.54□□□□□ -2
IRX4P78413 AC092989.1-201ENST00000481235 277 ntBASIC2.54□□□□□ -2
IRX4P78413 MTCO3P9-201ENST00000506989 781 ntBASIC2.54□□□□□ -2
IRX4P78413 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.54□□□□□ -2
IRX4P78413 SNORA31.6-201ENST00000516241 130 ntBASIC2.54□□□□□ -2
IRX4P78413 RNU6-1183P-201ENST00000517054 60 ntBASIC2.54□□□□□ -2
IRX4P78413 SCARNA11.3-201ENST00000517276 130 ntBASIC2.54□□□□□ -2
IRX4P78413 AC009902.1-201ENST00000519351 183 ntBASIC2.54□□□□□ -2
IRX4P78413 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.54□□□□□ -2
IRX4P78413 AC006199.1-201ENST00000548728 219 ntBASIC2.54□□□□□ -2
IRX4P78413 AL121821.2-201ENST00000556081 394 ntBASIC2.54□□□□□ -2
IRX4P78413 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.54□□□□□ -2
IRX4P78413 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.54□□□□□ -2
IRX4P78413 DEFB122-202ENST00000569013 197 ntBASIC2.54□□□□□ -2
IRX4P78413 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.54□□□□□ -2
IRX4P78413 AC025754.2-201ENST00000606491 432 ntBASIC2.54□□□□□ -2
IRX4P78413 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.54□□□□□ -2
IRX4P78413 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.53□□□□□ -2
IRX4P78413 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.53□□□□□ -2
IRX4P78413 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
IRX4P78413 RNA5SP393-201ENST00000363423 117 ntBASIC2.53□□□□□ -2
IRX4P78413 RNY4P14-201ENST00000363656 96 ntBASIC2.53□□□□□ -2
IRX4P78413 U8.8-201ENST00000365399 135 ntBASIC2.53□□□□□ -2
IRX4P78413 SNORA75B-201ENST00000384053 137 ntBASIC2.53□□□□□ -2
IRX4P78413 MIR578-201ENST00000384828 96 ntBASIC2.53□□□□□ -2
IRX4P78413 MIR764-201ENST00000390811 85 ntBASIC2.53□□□□□ -2
IRX4P78413 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.53□□□□□ -2
IRX4P78413 AL162578.1-201ENST00000406202 378 ntBASIC2.53□□□□□ -2
IRX4P78413 AL606923.1-201ENST00000406616 190 ntBASIC2.53□□□□□ -2
IRX4P78413 RNU6-908P-201ENST00000410160 94 ntBASIC2.53□□□□□ -2
IRX4P78413 RNU2-25P-201ENST00000411041 191 ntBASIC2.53□□□□□ -2
IRX4P78413 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.53□□□□□ -2
IRX4P78413 HMGB1P18-201ENST00000438801 619 ntBASIC2.53□□□□□ -2
IRX4P78413 AL161651.1-201ENST00000440882 223 ntBASIC2.53□□□□□ -2
IRX4P78413 HIGD1AP2-201ENST00000446367 280 ntBASIC2.53□□□□□ -2
IRX4P78413 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.53□□□□□ -2
IRX4P78413 RN7SL636P-201ENST00000497504 294 ntBASIC2.53□□□□□ -2
IRX4P78413 AC112206.3-201ENST00000514578 389 ntBASIC2.53□□□□□ -2
IRX4P78413 RNU6-1178P-201ENST00000516674 107 ntBASIC2.53□□□□□ -2
IRX4P78413 BTF3P12-201ENST00000519620 469 ntBASIC2.53□□□□□ -2
IRX4P78413 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.53□□□□□ -2
IRX4P78413 MTND1P35-201ENST00000526739 508 ntBASIC2.53□□□□□ -2
IRX4P78413 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.53□□□□□ -2
IRX4P78413 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.53□□□□□ -2
IRX4P78413 AC087241.2-201ENST00000535801 324 ntBASIC2.53□□□□□ -2
IRX4P78413 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.53□□□□□ -2
IRX4P78413 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.53□□□□□ -2
IRX4P78413 MIR1273C-201ENST00000578669 77 ntBASIC2.53□□□□□ -2
IRX4P78413 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.53□□□□□ -2
IRX4P78413 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.53□□□□□ -2
IRX4P78413 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.53□□□□□ -2
IRX4P78413 AL391813.1-201ENST00000603098 260 ntBASIC2.53□□□□□ -2
IRX4P78413 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.53□□□□□ -2
IRX4P78413 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.53□□□□□ -2
IRX4P78413 FER-210ENST00000628534 558 ntTSL 5 BASIC2.53□□□□□ -2
IRX4P78413 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
IRX4P78413 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
IRX4P78413 MTND4P14-201ENST00000435799 1354 ntBASIC2.52□□□□□ -2.01
IRX4P78413 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
IRX4P78413 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
IRX4P78413 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
IRX4P78413 Y_RNA.38-201ENST00000362617 102 ntBASIC2.52□□□□□ -2.01
IRX4P78413 SNORD3E-201ENST00000362899 217 ntBASIC2.52□□□□□ -2.01
IRX4P78413 RNU6-715P-201ENST00000365204 103 ntBASIC2.52□□□□□ -2.01
IRX4P78413 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.52□□□□□ -2.01
IRX4P78413 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
IRX4P78413 Z98749.2-208ENST00000381646 500 ntBASIC2.52□□□□□ -2.01
IRX4P78413 Y_RNA.453-201ENST00000384223 109 ntBASIC2.52□□□□□ -2.01
IRX4P78413 MIR518C-201ENST00000384822 101 ntBASIC2.52□□□□□ -2.01
IRX4P78413 MIR144-201ENST00000384886 86 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms