Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.14□□□□□ -2.23
TPM4P67936 AL583843.1-201ENST00000456070 346 ntBASIC1.14□□□□□ -2.23
TPM4P67936 RPL30P12-201ENST00000474666 353 ntBASIC1.14□□□□□ -2.23
TPM4P67936 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
TPM4P67936 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.14□□□□□ -2.23
TPM4P67936 AC108078.1-201ENST00000508073 725 ntBASIC1.14□□□□□ -2.23
TPM4P67936 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.14□□□□□ -2.23
TPM4P67936 AC087894.1-201ENST00000538359 518 ntBASIC1.14□□□□□ -2.23
TPM4P67936 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
TPM4P67936 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.14□□□□□ -2.23
TPM4P67936 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
TPM4P67936 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.14□□□□□ -2.23
TPM4P67936 AC022022.2-201ENST00000602989 360 ntBASIC1.14□□□□□ -2.23
TPM4P67936 SNORD114-21-201ENST00000606412 72 ntBASIC1.14□□□□□ -2.23
TPM4P67936 AC022893.3-201ENST00000607665 437 ntBASIC1.14□□□□□ -2.23
TPM4P67936 AL157834.3-201ENST00000615543 103 ntBASIC1.14□□□□□ -2.23
TPM4P67936 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TPM4P67936 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TPM4P67936 RNA5SP327-201ENST00000362494 101 ntBASIC1.13□□□□□ -2.23
TPM4P67936 SNORD33-201ENST00000362761 85 ntBASIC1.13□□□□□ -2.23
TPM4P67936 SNORA70.7-201ENST00000384159 133 ntBASIC1.13□□□□□ -2.23
TPM4P67936 RPL23AP36-201ENST00000413895 458 ntBASIC1.13□□□□□ -2.23
TPM4P67936 CST2P1-201ENST00000425770 87 ntBASIC1.13□□□□□ -2.23
TPM4P67936 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.13□□□□□ -2.23
TPM4P67936 RNU6-333P-201ENST00000459117 107 ntBASIC1.13□□□□□ -2.23
TPM4P67936 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.13□□□□□ -2.23
TPM4P67936 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.13□□□□□ -2.23
TPM4P67936 AC087441.2-201ENST00000529141 262 ntBASIC1.13□□□□□ -2.23
TPM4P67936 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.13□□□□□ -2.23
TPM4P67936 BNIP3P26-201ENST00000600827 554 ntBASIC1.13□□□□□ -2.23
TPM4P67936 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.13□□□□□ -2.23
TPM4P67936 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TPM4P67936 RNU4-51P-201ENST00000364206 140 ntBASIC1.12□□□□□ -2.23
TPM4P67936 RNU6-72P-201ENST00000384285 79 ntBASIC1.12□□□□□ -2.23
TPM4P67936 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.12□□□□□ -2.23
TPM4P67936 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TPM4P67936 SUMO2P5-201ENST00000506790 245 ntBASIC1.12□□□□□ -2.23
TPM4P67936 MTATP6P2-201ENST00000603319 678 ntBASIC1.12□□□□□ -2.23
TPM4P67936 HSPE1P19-201ENST00000603327 295 ntBASIC1.12□□□□□ -2.23
TPM4P67936 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TPM4P67936 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
TPM4P67936 Y_RNA.311-201ENST00000365068 96 ntBASIC1.11□□□□□ -2.23
TPM4P67936 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.11□□□□□ -2.23
TPM4P67936 RPL17P50-201ENST00000396131 546 ntBASIC1.11□□□□□ -2.23
TPM4P67936 MIR1305-201ENST00000408300 86 ntBASIC1.11□□□□□ -2.23
TPM4P67936 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.11□□□□□ -2.23
TPM4P67936 DYNLT3P2-201ENST00000442517 295 ntBASIC1.11□□□□□ -2.23
TPM4P67936 AL022238.1-201ENST00000442557 355 ntBASIC1.11□□□□□ -2.23
TPM4P67936 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TPM4P67936 AL139824.2-201ENST00000458731 1095 ntBASIC1.11□□□□□ -2.23
TPM4P67936 SNORA59A-201ENST00000459326 152 ntBASIC1.11□□□□□ -2.23
TPM4P67936 MTND1P16-201ENST00000465177 898 ntBASIC1.11□□□□□ -2.23
TPM4P67936 AC087343.1-201ENST00000477341 475 ntBASIC1.11□□□□□ -2.23
TPM4P67936 RNU6-677P-201ENST00000516914 101 ntBASIC1.11□□□□□ -2.23
TPM4P67936 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.11□□□□□ -2.23
TPM4P67936 AP000907.2-201ENST00000530827 353 ntBASIC1.11□□□□□ -2.23
TPM4P67936 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.11□□□□□ -2.23
TPM4P67936 AC245297.2-201ENST00000610119 565 ntBASIC1.11□□□□□ -2.23
TPM4P67936 MIR6078-201ENST00000611069 100 ntBASIC1.11□□□□□ -2.23
TPM4P67936 AC063943.3-201ENST00000615562 356 ntBASIC1.11□□□□□ -2.23
TPM4P67936 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.11□□□□□ -2.23
TPM4P67936 MTND5P9-201ENST00000503854 1755 ntBASIC1.11□□□□□ -2.23
TPM4P67936 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TPM4P67936 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.1□□□□□ -2.23
TPM4P67936 SNORD116-20-201ENST00000384529 92 ntBASIC1.1□□□□□ -2.23
TPM4P67936 RNU6-360P-201ENST00000390944 104 ntBASIC1.1□□□□□ -2.23
TPM4P67936 Y_RNA.623-201ENST00000411128 95 ntBASIC1.1□□□□□ -2.23
TPM4P67936 USP9YP33-201ENST00000412220 421 ntBASIC1.1□□□□□ -2.23
TPM4P67936 RPL21P90-201ENST00000415692 466 ntBASIC1.1□□□□□ -2.23
TPM4P67936 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.1□□□□□ -2.23
TPM4P67936 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.1□□□□□ -2.23
TPM4P67936 C8orf59P1-201ENST00000429930 303 ntBASIC1.1□□□□□ -2.23
TPM4P67936 RPS6P15-201ENST00000431996 751 ntBASIC1.1□□□□□ -2.23
TPM4P67936 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.1□□□□□ -2.23
TPM4P67936 HMGN2P18-201ENST00000450680 270 ntBASIC1.1□□□□□ -2.23
TPM4P67936 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.1□□□□□ -2.23
TPM4P67936 RNU1-131P-201ENST00000458943 161 ntBASIC1.1□□□□□ -2.23
TPM4P67936 AC009646.1-201ENST00000510455 318 ntBASIC1.1□□□□□ -2.23
TPM4P67936 RPL23AP94-201ENST00000512518 302 ntBASIC1.1□□□□□ -2.23
TPM4P67936 AC019176.1-201ENST00000518519 225 ntBASIC1.1□□□□□ -2.23
TPM4P67936 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.1□□□□□ -2.23
TPM4P67936 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.1□□□□□ -2.23
TPM4P67936 AP003049.1-201ENST00000529418 457 ntBASIC1.1□□□□□ -2.23
TPM4P67936 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.1□□□□□ -2.23
TPM4P67936 MIR5094-201ENST00000578766 85 ntBASIC1.1□□□□□ -2.23
TPM4P67936 MIR3937-201ENST00000580135 106 ntBASIC1.1□□□□□ -2.23
TPM4P67936 AC112220.2-201ENST00000605513 533 ntBASIC1.1□□□□□ -2.23
TPM4P67936 AL512506.1-201ENST00000613918 449 ntBASIC1.1□□□□□ -2.23
TPM4P67936 AC130324.3-201ENST00000614165 542 ntBASIC1.1□□□□□ -2.23
TPM4P67936 AL159153.1-201ENST00000619688 317 ntBASIC1.1□□□□□ -2.23
TPM4P67936 AL589994.2-201ENST00000621124 579 ntBASIC1.1□□□□□ -2.23
TPM4P67936 AC007792.1-201ENST00000623023 402 ntBASIC1.1□□□□□ -2.23
TPM4P67936 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
TPM4P67936 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TPM4P67936 AC100821.1-201ENST00000523153 2479 ntBASIC1.09□□□□□ -2.23
TPM4P67936 RNU6-1187P-201ENST00000364771 110 ntBASIC1.09□□□□□ -2.23
TPM4P67936 SMIM11P1-201ENST00000369586 178 ntBASIC1.09□□□□□ -2.23
TPM4P67936 PIGPP2-201ENST00000411569 458 ntBASIC1.09□□□□□ -2.23
TPM4P67936 RPL21P111-201ENST00000418453 477 ntBASIC1.09□□□□□ -2.23
TPM4P67936 SNRPEP10-201ENST00000420249 274 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms