Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC099677.2-201ENST00000436385 175 ntBASIC0.41□□□□□ -2.34
RPS28P62857 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.41□□□□□ -2.34
RPS28P62857 SNRPFP4-201ENST00000456366 242 ntBASIC0.41□□□□□ -2.34
RPS28P62857 AC004924.1-201ENST00000480160 781 ntBASIC0.41□□□□□ -2.34
RPS28P62857 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.41□□□□□ -2.34
RPS28P62857 COX6CP6-201ENST00000490840 228 ntBASIC0.41□□□□□ -2.34
RPS28P62857 MIR449C-201ENST00000516047 92 ntBASIC0.41□□□□□ -2.34
RPS28P62857 MTND1P36-201ENST00000522384 936 ntBASIC0.41□□□□□ -2.34
RPS28P62857 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.41□□□□□ -2.34
RPS28P62857 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
RPS28P62857 AL157871.3-201ENST00000557231 293 ntBASIC0.41□□□□□ -2.34
RPS28P62857 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.41□□□□□ -2.34
RPS28P62857 MIR4697-201ENST00000582977 78 ntBASIC0.41□□□□□ -2.34
RPS28P62857 BNIP3P8-201ENST00000597863 560 ntBASIC0.41□□□□□ -2.34
RPS28P62857 AC004987.4-201ENST00000603383 338 ntBASIC0.41□□□□□ -2.34
RPS28P62857 AL445435.1-201ENST00000604232 665 ntBASIC0.41□□□□□ -2.34
RPS28P62857 MIR3976-201ENST00000606807 139 ntBASIC0.41□□□□□ -2.34
RPS28P62857 AL451064.1-201ENST00000607718 471 ntBASIC0.41□□□□□ -2.34
RPS28P62857 AC006133.1-201ENST00000617106 264 ntBASIC0.41□□□□□ -2.34
RPS28P62857 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
RPS28P62857 AC006386.2-201ENST00000624491 75 ntBASIC0.41□□□□□ -2.34
RPS28P62857 AC012005.1-201ENST00000624575 75 ntBASIC0.41□□□□□ -2.34
RPS28P62857 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
RPS28P62857 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
RPS28P62857 Y_RNA.33-201ENST00000362591 102 ntBASIC0.4□□□□□ -2.35
RPS28P62857 RNU4-79P-201ENST00000362764 141 ntBASIC0.4□□□□□ -2.35
RPS28P62857 RNU6-1284P-201ENST00000363701 100 ntBASIC0.4□□□□□ -2.35
RPS28P62857 RNU6-1019P-201ENST00000364424 107 ntBASIC0.4□□□□□ -2.35
RPS28P62857 RNU4-12P-201ENST00000365233 139 ntBASIC0.4□□□□□ -2.35
RPS28P62857 MIR92A1-201ENST00000385233 78 ntBASIC0.4□□□□□ -2.35
RPS28P62857 MIR942-201ENST00000401111 86 ntBASIC0.4□□□□□ -2.35
RPS28P62857 RNA5SP390-201ENST00000410191 113 ntBASIC0.4□□□□□ -2.35
RPS28P62857 BX664727.1-201ENST00000416024 466 ntBASIC0.4□□□□□ -2.35
RPS28P62857 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.4□□□□□ -2.35
RPS28P62857 AL365400.1-201ENST00000431854 640 ntBASIC0.4□□□□□ -2.35
RPS28P62857 AL139415.2-201ENST00000431968 163 ntBASIC0.4□□□□□ -2.35
RPS28P62857 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.4□□□□□ -2.35
RPS28P62857 AL583843.1-201ENST00000456070 346 ntBASIC0.4□□□□□ -2.35
RPS28P62857 SNORA31.2-201ENST00000516019 134 ntBASIC0.4□□□□□ -2.35
RPS28P62857 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.4□□□□□ -2.35
RPS28P62857 CR383656.8-201ENST00000549046 145 ntBASIC0.4□□□□□ -2.35
RPS28P62857 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.4□□□□□ -2.35
RPS28P62857 MIR3944-201ENST00000581277 108 ntBASIC0.4□□□□□ -2.35
RPS28P62857 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC0.4□□□□□ -2.35
RPS28P62857 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.4□□□□□ -2.35
RPS28P62857 AL358072.1-201ENST00000604156 575 ntBASIC0.4□□□□□ -2.35
RPS28P62857 AC106858.1-201ENST00000637497 429 ntBASIC0.4□□□□□ -2.35
RPS28P62857 MIR6866-201ENST00000638146 69 ntBASIC0.4□□□□□ -2.35
RPS28P62857 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
RPS28P62857 RNU6-942P-201ENST00000363002 107 ntBASIC0.39□□□□□ -2.35
RPS28P62857 Y_RNA.124-201ENST00000363339 93 ntBASIC0.39□□□□□ -2.35
RPS28P62857 SNORA63D-201ENST00000364359 132 ntBASIC0.39□□□□□ -2.35
RPS28P62857 5S_rRNA.1-201ENST00000364415 116 ntBASIC0.39□□□□□ -2.35
RPS28P62857 RNU6ATAC37P-201ENST00000408328 131 ntBASIC0.39□□□□□ -2.35
RPS28P62857 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.39□□□□□ -2.35
RPS28P62857 MTCO3P29-201ENST00000432119 779 ntBASIC0.39□□□□□ -2.35
RPS28P62857 AC069257.2-201ENST00000441819 155 ntBASIC0.39□□□□□ -2.35
RPS28P62857 AC087343.1-201ENST00000477341 475 ntBASIC0.39□□□□□ -2.35
RPS28P62857 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC0.39□□□□□ -2.35
RPS28P62857 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.39□□□□□ -2.35
RPS28P62857 AL121579.1-201ENST00000555129 305 ntBASIC0.39□□□□□ -2.35
RPS28P62857 AC091489.2-201ENST00000566263 604 ntBASIC0.39□□□□□ -2.35
RPS28P62857 AC034105.4-201ENST00000568304 277 ntBASIC0.39□□□□□ -2.35
RPS28P62857 MIR5708-201ENST00000579723 85 ntBASIC0.39□□□□□ -2.35
RPS28P62857 AP001004.1-201ENST00000582468 324 ntBASIC0.39□□□□□ -2.35
RPS28P62857 AC009229.3-201ENST00000608056 282 ntBASIC0.39□□□□□ -2.35
RPS28P62857 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.39□□□□□ -2.35
RPS28P62857 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC0.39□□□□□ -2.35
RPS28P62857 AC084824.5-201ENST00000612009 413 ntBASIC0.39□□□□□ -2.35
RPS28P62857 AC083806.3-201ENST00000614016 455 ntBASIC0.39□□□□□ -2.35
RPS28P62857 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.39□□□□□ -2.35
RPS28P62857 AL158163.2-201ENST00000619110 700 ntBASIC0.39□□□□□ -2.35
RPS28P62857 AC068831.8-201ENST00000620171 435 ntBASIC0.39□□□□□ -2.35
RPS28P62857 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.38□□□□□ -2.35
RPS28P62857 SNORA56-201ENST00000383966 129 ntBASIC0.38□□□□□ -2.35
RPS28P62857 RNU6-110P-201ENST00000384508 104 ntBASIC0.38□□□□□ -2.35
RPS28P62857 RNU6-14P-201ENST00000384630 106 ntBASIC0.38□□□□□ -2.35
RPS28P62857 MIR19A-201ENST00000384878 82 ntBASIC0.38□□□□□ -2.35
RPS28P62857 SNORD12-201ENST00000391002 90 ntBASIC0.38□□□□□ -2.35
RPS28P62857 RNU6-174P-201ENST00000410406 106 ntBASIC0.38□□□□□ -2.35
RPS28P62857 AC083875.1-201ENST00000419509 405 ntBASIC0.38□□□□□ -2.35
RPS28P62857 CETN4P-201ENST00000432407 469 ntBASIC0.38□□□□□ -2.35
RPS28P62857 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.38□□□□□ -2.35
RPS28P62857 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.38□□□□□ -2.35
RPS28P62857 ATP5J2P3-201ENST00000451550 258 ntBASIC0.38□□□□□ -2.35
RPS28P62857 AC010486.1-201ENST00000511793 424 ntBASIC0.38□□□□□ -2.35
RPS28P62857 RNU6-1225P-201ENST00000516336 65 ntBASIC0.38□□□□□ -2.35
RPS28P62857 RNU6-165P-201ENST00000517170 99 ntBASIC0.38□□□□□ -2.35
RPS28P62857 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC0.38□□□□□ -2.35
RPS28P62857 AC021451.1-201ENST00000523498 1129 ntBASIC0.38□□□□□ -2.35
RPS28P62857 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.38□□□□□ -2.35
RPS28P62857 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC0.38□□□□□ -2.35
RPS28P62857 MIR4709-201ENST00000577272 72 ntBASIC0.38□□□□□ -2.35
RPS28P62857 AC103987.3-201ENST00000582071 292 ntBASIC0.38□□□□□ -2.35
RPS28P62857 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC0.38□□□□□ -2.35
RPS28P62857 PCMTD1P7-201ENST00000634506 357 ntBASIC0.38□□□□□ -2.35
RPS28P62857 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
RPS28P62857 AC023934.1-201ENST00000574529 2389 ntBASIC0.38□□□□□ -2.35
RPS28P62857 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
RPS28P62857 RNU6-289P-201ENST00000364093 107 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms