Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 LINC02555-201ENST00000563933 1951 ntBASIC0.54□□□□□ -2.32
LSM3P62310 RNU6-744P-201ENST00000365557 107 ntBASIC0.54□□□□□ -2.32
LSM3P62310 RNU6-1316P-201ENST00000384242 108 ntBASIC0.54□□□□□ -2.32
LSM3P62310 RNU6-622P-201ENST00000384272 103 ntBASIC0.54□□□□□ -2.32
LSM3P62310 RNU6-843P-201ENST00000384454 104 ntBASIC0.54□□□□□ -2.32
LSM3P62310 RNU6-1065P-201ENST00000384513 106 ntBASIC0.54□□□□□ -2.32
LSM3P62310 RNU6-883P-201ENST00000384597 107 ntBASIC0.54□□□□□ -2.32
LSM3P62310 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
LSM3P62310 AL079342.2-201ENST00000403367 482 ntBASIC0.54□□□□□ -2.32
LSM3P62310 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.54□□□□□ -2.32
LSM3P62310 CYCSP33-201ENST00000414485 327 ntBASIC0.54□□□□□ -2.32
LSM3P62310 AC010099.3-201ENST00000423896 409 ntBASIC0.54□□□□□ -2.32
LSM3P62310 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.54□□□□□ -2.32
LSM3P62310 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.54□□□□□ -2.32
LSM3P62310 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
LSM3P62310 snoU13.30-201ENST00000458951 104 ntBASIC0.54□□□□□ -2.32
LSM3P62310 SNORD124-201ENST00000459577 104 ntBASIC0.54□□□□□ -2.32
LSM3P62310 AL163195.1-201ENST00000496941 348 ntBASIC0.54□□□□□ -2.32
LSM3P62310 MIR449C-201ENST00000516047 92 ntBASIC0.54□□□□□ -2.32
LSM3P62310 RNY4P37-201ENST00000516225 96 ntBASIC0.54□□□□□ -2.32
LSM3P62310 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.54□□□□□ -2.32
LSM3P62310 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.54□□□□□ -2.32
LSM3P62310 AC060771.1-201ENST00000582031 164 ntBASIC0.54□□□□□ -2.32
LSM3P62310 AL445435.1-201ENST00000604232 665 ntBASIC0.54□□□□□ -2.32
LSM3P62310 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.54□□□□□ -2.32
LSM3P62310 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.53□□□□□ -2.32
LSM3P62310 SNORA29-201ENST00000384183 140 ntBASIC0.53□□□□□ -2.32
LSM3P62310 MIR222-201ENST00000384992 110 ntBASIC0.53□□□□□ -2.32
LSM3P62310 RNU6-360P-201ENST00000390944 104 ntBASIC0.53□□□□□ -2.32
LSM3P62310 RNU6-482P-201ENST00000391068 107 ntBASIC0.53□□□□□ -2.32
LSM3P62310 RNU6-733P-201ENST00000410759 104 ntBASIC0.53□□□□□ -2.32
LSM3P62310 BX664727.1-201ENST00000416024 466 ntBASIC0.53□□□□□ -2.32
LSM3P62310 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.53□□□□□ -2.32
LSM3P62310 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.53□□□□□ -2.32
LSM3P62310 ZFAND6P1-201ENST00000434138 605 ntBASIC0.53□□□□□ -2.32
LSM3P62310 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.53□□□□□ -2.32
LSM3P62310 AL513124.1-201ENST00000450410 614 ntBASIC0.53□□□□□ -2.32
LSM3P62310 RPL18AP17-201ENST00000455326 198 ntBASIC0.53□□□□□ -2.32
LSM3P62310 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.53□□□□□ -2.32
LSM3P62310 RNU6-322P-201ENST00000516010 103 ntBASIC0.53□□□□□ -2.32
LSM3P62310 DEFB108E-201ENST00000524692 240 ntBASIC0.53□□□□□ -2.32
LSM3P62310 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.53□□□□□ -2.32
LSM3P62310 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.53□□□□□ -2.32
LSM3P62310 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.53□□□□□ -2.32
LSM3P62310 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
LSM3P62310 TRAV32-201ENST00000553993 340 ntBASIC0.53□□□□□ -2.32
LSM3P62310 AC126365.2-201ENST00000580630 379 ntBASIC0.53□□□□□ -2.32
LSM3P62310 MIR4661-201ENST00000582720 75 ntBASIC0.53□□□□□ -2.32
LSM3P62310 AL158827.2-201ENST00000602494 330 ntBASIC0.53□□□□□ -2.32
LSM3P62310 OR4H6P-202ENST00000603819 340 ntBASIC0.53□□□□□ -2.32
LSM3P62310 AL391646.1-201ENST00000603860 190 ntBASIC0.53□□□□□ -2.32
LSM3P62310 AL451064.1-201ENST00000607718 471 ntBASIC0.53□□□□□ -2.32
LSM3P62310 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.53□□□□□ -2.32
LSM3P62310 MIR6835-201ENST00000621552 64 ntBASIC0.53□□□□□ -2.32
LSM3P62310 AC092656.1-203ENST00000624134 423 ntBASIC0.53□□□□□ -2.32
LSM3P62310 AL691447.3-201ENST00000635020 330 ntBASIC0.53□□□□□ -2.32
LSM3P62310 AL512643.1-201ENST00000635735 524 ntBASIC0.53□□□□□ -2.32
LSM3P62310 AL391987.6-201ENST00000305671 199 ntBASIC0.52□□□□□ -2.33
LSM3P62310 RNU6-942P-201ENST00000363002 107 ntBASIC0.52□□□□□ -2.33
LSM3P62310 RNU6-1122P-201ENST00000384449 107 ntBASIC0.52□□□□□ -2.33
LSM3P62310 FCF1P10-201ENST00000407590 479 ntBASIC0.52□□□□□ -2.33
LSM3P62310 SNX2P2-201ENST00000424553 323 ntBASIC0.52□□□□□ -2.33
LSM3P62310 RPS15AP10-201ENST00000432472 382 ntBASIC0.52□□□□□ -2.33
LSM3P62310 TIMM9P1-201ENST00000436122 256 ntBASIC0.52□□□□□ -2.33
LSM3P62310 AC005094.1-201ENST00000440420 368 ntBASIC0.52□□□□□ -2.33
LSM3P62310 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.52□□□□□ -2.33
LSM3P62310 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.52□□□□□ -2.33
LSM3P62310 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.52□□□□□ -2.33
LSM3P62310 RNU6-150P-201ENST00000516237 95 ntBASIC0.52□□□□□ -2.33
LSM3P62310 SNORA26.10-201ENST00000516427 141 ntBASIC0.52□□□□□ -2.33
LSM3P62310 RN7SKP265-201ENST00000516448 223 ntBASIC0.52□□□□□ -2.33
LSM3P62310 SNORA31.16-201ENST00000516773 139 ntBASIC0.52□□□□□ -2.33
LSM3P62310 RNA5SP503-201ENST00000517047 117 ntBASIC0.52□□□□□ -2.33
LSM3P62310 AC104072.1-201ENST00000568817 668 ntBASIC0.52□□□□□ -2.33
LSM3P62310 AC137800.2-201ENST00000574375 120 ntBASIC0.52□□□□□ -2.33
LSM3P62310 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.52□□□□□ -2.33
LSM3P62310 MIR4293-201ENST00000584305 78 ntBASIC0.52□□□□□ -2.33
LSM3P62310 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.52□□□□□ -2.33
LSM3P62310 AC084824.5-201ENST00000612009 413 ntBASIC0.52□□□□□ -2.33
LSM3P62310 RMST_4.1-201ENST00000616886 107 ntBASIC0.52□□□□□ -2.33
LSM3P62310 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.52□□□□□ -2.33
LSM3P62310 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.52□□□□□ -2.33
LSM3P62310 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
LSM3P62310 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
LSM3P62310 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.52□□□□□ -2.33
LSM3P62310 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
LSM3P62310 MIR340-201ENST00000362125 95 ntBASIC0.51□□□□□ -2.33
LSM3P62310 SNORD114-27-201ENST00000363766 70 ntBASIC0.51□□□□□ -2.33
LSM3P62310 RNU6-289P-201ENST00000364093 107 ntBASIC0.51□□□□□ -2.33
LSM3P62310 SNORA75B-201ENST00000384053 137 ntBASIC0.51□□□□□ -2.33
LSM3P62310 RNU6-701P-201ENST00000384059 107 ntBASIC0.51□□□□□ -2.33
LSM3P62310 MIR29B2-201ENST00000385055 81 ntBASIC0.51□□□□□ -2.33
LSM3P62310 RPS26P5-201ENST00000418544 335 ntBASIC0.51□□□□□ -2.33
LSM3P62310 RPS15AP12-201ENST00000419498 388 ntBASIC0.51□□□□□ -2.33
LSM3P62310 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.51□□□□□ -2.33
LSM3P62310 MTCO1P3-201ENST00000429327 192 ntBASIC0.51□□□□□ -2.33
LSM3P62310 MTND4P25-201ENST00000441039 533 ntBASIC0.51□□□□□ -2.33
LSM3P62310 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.51□□□□□ -2.33
LSM3P62310 MTND4P21-201ENST00000453886 1357 ntBASIC0.51□□□□□ -2.33
LSM3P62310 snoU13.26-201ENST00000459452 105 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms