Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MIR194-1-201ENST00000384892 85 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CKS1BP61024 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.46□□□□□ -2.34
CKS1BP61024 MTCYBP15-201ENST00000433123 1127 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.46□□□□□ -2.34
CKS1BP61024 snoU13.14-201ENST00000459372 104 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 MTND1P16-201ENST00000465177 898 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 RPS27P22-201ENST00000478056 241 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 AC117454.1-201ENST00000491120 168 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 RNU5A-4P-201ENST00000516588 111 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 RNA5SP437-201ENST00000517249 129 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 AC090142.3-201ENST00000519012 385 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 AC009902.1-201ENST00000519351 183 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.46□□□□□ -2.34
CKS1BP61024 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.46□□□□□ -2.34
CKS1BP61024 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.46□□□□□ -2.34
CKS1BP61024 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.46□□□□□ -2.34
CKS1BP61024 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.46□□□□□ -2.34
CKS1BP61024 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.46□□□□□ -2.34
CKS1BP61024 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.46□□□□□ -2.34
CKS1BP61024 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.46□□□□□ -2.34
CKS1BP61024 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.46□□□□□ -2.34
CKS1BP61024 BNIP3P30-201ENST00000601184 574 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 AC243773.3-201ENST00000613270 256 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 MIR6835-201ENST00000621552 64 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.46□□□□□ -2.34
CKS1BP61024 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.45□□□□□ -2.34
CKS1BP61024 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
CKS1BP61024 RNU6-53P-201ENST00000365367 106 ntBASIC0.45□□□□□ -2.34
CKS1BP61024 RNU6-1080P-201ENST00000383982 107 ntBASIC0.45□□□□□ -2.34
CKS1BP61024 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.45□□□□□ -2.34
CKS1BP61024 AC004941.2-201ENST00000427009 228 ntBASIC0.45□□□□□ -2.34
CKS1BP61024 TRIM60P13-201ENST00000432350 1283 ntBASIC0.45□□□□□ -2.34
CKS1BP61024 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.45□□□□□ -2.34
CKS1BP61024 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.45□□□□□ -2.34
CKS1BP61024 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.45□□□□□ -2.34
CKS1BP61024 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.45□□□□□ -2.34
CKS1BP61024 ARL2BPP4-201ENST00000506854 471 ntBASIC0.45□□□□□ -2.34
CKS1BP61024 AC097473.1-201ENST00000508142 408 ntBASIC0.45□□□□□ -2.34
CKS1BP61024 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.45□□□□□ -2.34
CKS1BP61024 AC022022.2-201ENST00000602989 360 ntBASIC0.45□□□□□ -2.34
CKS1BP61024 RMST_4.1-201ENST00000616886 107 ntBASIC0.45□□□□□ -2.34
CKS1BP61024 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CKS1BP61024 RNU6-858P-201ENST00000362436 107 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 MIR92A1-201ENST00000385233 78 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 AL357139.1-201ENST00000407792 426 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 RNU2-7P-201ENST00000410794 178 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 RPL21P24-201ENST00000413752 448 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 RPS26P5-201ENST00000418544 335 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.44□□□□□ -2.34
CKS1BP61024 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.44□□□□□ -2.34
CKS1BP61024 AC244505.5-201ENST00000443639 207 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 AC012308.1-201ENST00000451232 178 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 BET1P1-201ENST00000482276 359 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 COX6CP6-201ENST00000490840 228 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
CKS1BP61024 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.44□□□□□ -2.34
CKS1BP61024 SNORD60.2-201ENST00000516883 86 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.44□□□□□ -2.34
CKS1BP61024 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.44□□□□□ -2.34
CKS1BP61024 MIR3973-201ENST00000579824 107 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 AC107304.1-201ENST00000604229 296 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 AC090578.1-201ENST00000604955 591 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 AC084824.5-201ENST00000612009 413 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 AC010975.3-201ENST00000618727 978 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 AC120349.2-201ENST00000625002 298 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.44□□□□□ -2.34
CKS1BP61024 AC068647.2-201ENST00000637380 353 ntBASIC0.44□□□□□ -2.34
CKS1BP61024 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
CKS1BP61024 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CKS1BP61024 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
CKS1BP61024 SNORD114-27-201ENST00000363766 70 ntBASIC0.43□□□□□ -2.34
CKS1BP61024 RNU6-110P-201ENST00000384508 104 ntBASIC0.43□□□□□ -2.34
CKS1BP61024 MIR200A-201ENST00000384875 90 ntBASIC0.43□□□□□ -2.34
CKS1BP61024 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.43□□□□□ -2.34
CKS1BP61024 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.43□□□□□ -2.34
CKS1BP61024 AL078601.1-201ENST00000444542 271 ntBASIC0.43□□□□□ -2.34
CKS1BP61024 RNA5SP121-201ENST00000516537 101 ntBASIC0.43□□□□□ -2.34
CKS1BP61024 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.43□□□□□ -2.34
CKS1BP61024 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.43□□□□□ -2.34
CKS1BP61024 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.43□□□□□ -2.34
CKS1BP61024 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.43□□□□□ -2.34
CKS1BP61024 MIR4524B-201ENST00000581569 115 ntBASIC0.43□□□□□ -2.34
CKS1BP61024 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.43□□□□□ -2.34
CKS1BP61024 AC069114.2-201ENST00000604699 304 ntBASIC0.43□□□□□ -2.34
CKS1BP61024 AP000654.2-201ENST00000605633 586 ntBASIC0.43□□□□□ -2.34
CKS1BP61024 snoU13.31-201ENST00000607291 104 ntBASIC0.43□□□□□ -2.34
CKS1BP61024 AC009229.3-201ENST00000608056 282 ntBASIC0.43□□□□□ -2.34
CKS1BP61024 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.43□□□□□ -2.34
CKS1BP61024 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.42□□□□□ -2.34
CKS1BP61024 RNU2-23P-201ENST00000410545 195 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 RPS3AP1-201ENST00000413190 320 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 UBE2V1P10-201ENST00000414685 269 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.42□□□□□ -2.34
CKS1BP61024 AL592045.1-201ENST00000429867 352 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.42□□□□□ -2.34
CKS1BP61024 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.42□□□□□ -2.34
CKS1BP61024 MTCO2P25-201ENST00000447065 681 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 SNORD124-201ENST00000459577 104 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 TOMM22P6-201ENST00000465035 409 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms