Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.81□□□□□ -2.28
HIST1H2BDP58876 AL122001.1-201ENST00000457027 370 ntBASIC0.81□□□□□ -2.28
HIST1H2BDP58876 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
HIST1H2BDP58876 RPL9P9-202ENST00000466501 579 ntBASIC0.81□□□□□ -2.28
HIST1H2BDP58876 MIR449C-201ENST00000516047 92 ntBASIC0.81□□□□□ -2.28
HIST1H2BDP58876 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.81□□□□□ -2.28
HIST1H2BDP58876 AC023050.2-201ENST00000544968 387 ntBASIC0.81□□□□□ -2.28
HIST1H2BDP58876 AC091135.1-201ENST00000585943 307 ntBASIC0.81□□□□□ -2.28
HIST1H2BDP58876 AP003465.2-201ENST00000602571 373 ntBASIC0.81□□□□□ -2.28
HIST1H2BDP58876 AL391001.1-201ENST00000602747 715 ntBASIC0.81□□□□□ -2.28
HIST1H2BDP58876 AL136363.2-201ENST00000604173 851 ntBASIC0.81□□□□□ -2.28
HIST1H2BDP58876 AL355802.3-201ENST00000607571 545 ntBASIC0.81□□□□□ -2.28
HIST1H2BDP58876 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.81□□□□□ -2.28
HIST1H2BDP58876 AC013412.1-201ENST00000610687 192 ntBASIC0.81□□□□□ -2.28
HIST1H2BDP58876 uc_338.12-201ENST00000616344 181 ntBASIC0.81□□□□□ -2.28
HIST1H2BDP58876 AL356596.1-201ENST00000624230 379 ntBASIC0.81□□□□□ -2.28
HIST1H2BDP58876 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC0.81□□□□□ -2.28
HIST1H2BDP58876 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HIST1H2BDP58876 MIR340-201ENST00000362125 95 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 SNORD32B-201ENST00000364460 84 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
HIST1H2BDP58876 MIR548B-201ENST00000385247 97 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
HIST1H2BDP58876 RPS3AP36-201ENST00000398190 775 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 RN7SKP223-201ENST00000410582 62 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 RN7SKP192-201ENST00000411291 327 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 PIGPP2-201ENST00000411569 458 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.8□□□□□ -2.28
HIST1H2BDP58876 EIF1P1-201ENST00000421436 341 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 RPL23AP30-201ENST00000432419 501 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 RPL32P28-201ENST00000443577 397 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC0.8□□□□□ -2.28
HIST1H2BDP58876 FTH1P25-201ENST00000447665 469 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 AL353705.4-201ENST00000449661 238 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 AC006026.2-201ENST00000457376 180 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 RNA5SP269-201ENST00000459032 137 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 RPL36AP21-201ENST00000490372 323 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.8□□□□□ -2.28
HIST1H2BDP58876 MTND2P33-201ENST00000506452 1031 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.8□□□□□ -2.28
HIST1H2BDP58876 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.8□□□□□ -2.28
HIST1H2BDP58876 RNA5SP404-201ENST00000517118 132 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.8□□□□□ -2.28
HIST1H2BDP58876 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.8□□□□□ -2.28
HIST1H2BDP58876 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.8□□□□□ -2.28
HIST1H2BDP58876 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.8□□□□□ -2.28
HIST1H2BDP58876 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 HMGB1P33-201ENST00000563485 527 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 AC015688.6-201ENST00000577737 104 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 MIR5195-201ENST00000583555 115 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 MIR3660-201ENST00000584845 100 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 AL353778.1-201ENST00000603149 408 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 AC112220.3-201ENST00000605502 502 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 AC108747.1-201ENST00000609508 535 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 U6.42-201ENST00000618440 107 ntBASIC0.8□□□□□ -2.28
HIST1H2BDP58876 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
HIST1H2BDP58876 RNU6-433P-201ENST00000363216 104 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 RNU6-384P-201ENST00000364900 104 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 SNORD116.1-201ENST00000365628 92 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 RNU6-26P-201ENST00000383985 107 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 SNORA70.7-201ENST00000384159 133 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 MIR520A-201ENST00000384862 85 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 AL161935.2-201ENST00000414627 60 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H2BDP58876 CST2P1-201ENST00000425770 87 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H2BDP58876 FTH1P12-201ENST00000432137 551 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 MTND1P30-201ENST00000441241 901 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H2BDP58876 AC010587.2-201ENST00000511727 448 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 RNU7-40P-201ENST00000516397 64 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 RNA5SP437-201ENST00000517249 129 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC0.79□□□□□ -2.28
HIST1H2BDP58876 CENPUP1-201ENST00000526649 1202 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 AC013828.2-201ENST00000532487 235 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H2BDP58876 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H2BDP58876 MTND4LP25-201ENST00000570218 163 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H2BDP58876 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.79□□□□□ -2.28
HIST1H2BDP58876 MIR4697-201ENST00000582977 78 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 MIR4295-201ENST00000585286 85 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 AL606834.3-201ENST00000602615 496 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 AC090578.1-201ENST00000604955 591 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 AL158211.2-201ENST00000607282 395 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC0.79□□□□□ -2.28
HIST1H2BDP58876 Y_RNA.46-201ENST00000362695 102 ntBASIC0.78□□□□□ -2.28
HIST1H2BDP58876 Y_RNA.255-201ENST00000364581 97 ntBASIC0.78□□□□□ -2.28
HIST1H2BDP58876 Y_RNA.465-201ENST00000384293 102 ntBASIC0.78□□□□□ -2.28
HIST1H2BDP58876 RNU6-174P-201ENST00000410406 106 ntBASIC0.78□□□□□ -2.28
HIST1H2BDP58876 RNU2-72P-201ENST00000411175 163 ntBASIC0.78□□□□□ -2.28
HIST1H2BDP58876 AC069282.1-201ENST00000411911 526 ntBASIC0.78□□□□□ -2.28
HIST1H2BDP58876 AC123900.1-201ENST00000420390 96 ntBASIC0.78□□□□□ -2.28
HIST1H2BDP58876 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
HIST1H2BDP58876 AC007969.2-201ENST00000441891 191 ntBASIC0.78□□□□□ -2.28
HIST1H2BDP58876 AC134050.1-201ENST00000495088 933 ntBASIC0.78□□□□□ -2.28
HIST1H2BDP58876 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.78□□□□□ -2.28
HIST1H2BDP58876 RNU5F-2P-201ENST00000516066 82 ntBASIC0.78□□□□□ -2.28
HIST1H2BDP58876 SNORA19.3-201ENST00000516165 130 ntBASIC0.78□□□□□ -2.28
HIST1H2BDP58876 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms