Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.29□□□□□ -1.88
CLRN1P58418 RPL30P14-201ENST00000482744 348 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 AC091874.1-201ENST00000511402 339 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.29□□□□□ -1.88
CLRN1P58418 RNU7-175P-201ENST00000515915 61 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 RNU6-911P-201ENST00000516523 104 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLRN1P58418 HMGN2P15-201ENST00000585707 270 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 KLKP1-201ENST00000595979 403 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 RPS29P30-201ENST00000600975 111 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 AC100812.1-201ENST00000607622 580 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 AC012531.5-201ENST00000611375 151 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 AC002076.2-201ENST00000617362 122 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 AC024581.2-201ENST00000619986 252 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 AP000553.6-201ENST00000641242 118 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLRN1P58418 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLRN1P58418 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
CLRN1P58418 ADAM3A-203ENST00000461344 2157 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 AC233981.2-201ENST00000611524 1614 ntBASIC3.29□□□□□ -1.88
CLRN1P58418 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CLRN1P58418 AF117829.1-206ENST00000621883 3802 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLRN1P58418 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLRN1P58418 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.28□□□□□ -1.88
CLRN1P58418 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLRN1P58418 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.28□□□□□ -1.88
CLRN1P58418 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.28□□□□□ -1.88
CLRN1P58418 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLRN1P58418 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLRN1P58418 RNU1-140P-201ENST00000365040 165 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 SNORD6-201ENST00000365444 73 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 Y_RNA.358-201ENST00000365491 99 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLRN1P58418 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.28□□□□□ -1.88
CLRN1P58418 RNU6-968P-201ENST00000384076 107 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 RNU6-708P-201ENST00000384217 107 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CLRN1P58418 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CLRN1P58418 SNORA57.3-201ENST00000411095 141 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 AL159169.1-201ENST00000421119 127 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 AC007969.2-201ENST00000441891 191 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.28□□□□□ -1.88
CLRN1P58418 RNU7-87P-201ENST00000459343 62 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.28□□□□□ -1.88
CLRN1P58418 Y_RNA.706-201ENST00000516933 99 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.28□□□□□ -1.88
CLRN1P58418 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.28□□□□□ -1.88
CLRN1P58418 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 MYL12BP1-201ENST00000569826 507 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 RPL23AP78-201ENST00000599928 470 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 VN1R85P-201ENST00000601587 426 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 RAC1P9-201ENST00000604990 392 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 AL159153.1-201ENST00000619688 317 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CLRN1P58418 AC244205.2-202ENST00000635781 342 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLRN1P58418 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLRN1P58418 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLRN1P58418 AP000560.1-201ENST00000624150 1937 ntBASIC3.28□□□□□ -1.88
CLRN1P58418 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CLRN1P58418 FAM35DP-201ENST00000323387 2712 ntBASIC3.28□□□□□ -1.89
CLRN1P58418 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.28□□□□□ -1.89
CLRN1P58418 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.28□□□□□ -1.89
CLRN1P58418 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.28□□□□□ -1.89
CLRN1P58418 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CLRN1P58418 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLRN1P58418 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.27□□□□□ -1.89
CLRN1P58418 Y_RNA.214-201ENST00000364201 112 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 RNA5SP515-201ENST00000364570 118 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 Y_RNA.556-201ENST00000384677 113 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 Y_RNA.618-201ENST00000410949 107 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 ELOCP20-201ENST00000422460 345 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 AL358453.1-201ENST00000422522 250 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.27□□□□□ -1.89
CLRN1P58418 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.27□□□□□ -1.89
CLRN1P58418 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.27□□□□□ -1.89
CLRN1P58418 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.27□□□□□ -1.89
CLRN1P58418 TOMM22P6-201ENST00000465035 409 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 RPL30P1-201ENST00000488676 339 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 AC074250.1-201ENST00000511117 192 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 RNU6-397P-201ENST00000516226 104 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 AC109329.1-201ENST00000518744 317 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 AC006199.1-201ENST00000548728 219 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 AC090517.1-201ENST00000569307 266 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.27□□□□□ -1.89
CLRN1P58418 MIR5187-201ENST00000583479 76 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 AC010928.2-201ENST00000588017 287 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.27□□□□□ -1.89
CLRN1P58418 AL390123.1-201ENST00000603216 237 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 AC019159.1-201ENST00000605094 187 ntBASIC3.27□□□□□ -1.89
CLRN1P58418 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.27□□□□□ -1.89
CLRN1P58418 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CLRN1P58418 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.27□□□□□ -1.89
CLRN1P58418 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLRN1P58418 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLRN1P58418 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CLRN1P58418 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLRN1P58418 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms