Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.68□□□□□ -2.14
VSX2P58304 AC096920.1-201ENST00000423991 241 ntBASIC1.68□□□□□ -2.14
VSX2P58304 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.68□□□□□ -2.14
VSX2P58304 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.68□□□□□ -2.14
VSX2P58304 AL627311.1-201ENST00000431514 115 ntBASIC1.68□□□□□ -2.14
VSX2P58304 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.68□□□□□ -2.14
VSX2P58304 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.68□□□□□ -2.14
VSX2P58304 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.68□□□□□ -2.14
VSX2P58304 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.68□□□□□ -2.14
VSX2P58304 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VSX2P58304 AC091965.2-201ENST00000512324 613 ntBASIC1.68□□□□□ -2.14
VSX2P58304 Y_RNA.672-201ENST00000516289 104 ntBASIC1.68□□□□□ -2.14
VSX2P58304 SNORA31.23-201ENST00000517219 133 ntBASIC1.68□□□□□ -2.14
VSX2P58304 CR383656.8-201ENST00000549046 145 ntBASIC1.68□□□□□ -2.14
VSX2P58304 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.68□□□□□ -2.14
VSX2P58304 PSMA3P-201ENST00000555485 635 ntBASIC1.68□□□□□ -2.14
VSX2P58304 AC109446.2-201ENST00000567872 497 ntBASIC1.68□□□□□ -2.14
VSX2P58304 AC090616.2-202ENST00000584248 222 ntBASIC1.68□□□□□ -2.14
VSX2P58304 BNIP3P30-201ENST00000601184 574 ntBASIC1.68□□□□□ -2.14
VSX2P58304 CLIC4P2-201ENST00000601934 717 ntBASIC1.68□□□□□ -2.14
VSX2P58304 AC022022.2-201ENST00000602989 360 ntBASIC1.68□□□□□ -2.14
VSX2P58304 AC021646.1-201ENST00000605469 484 ntBASIC1.68□□□□□ -2.14
VSX2P58304 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.68□□□□□ -2.14
VSX2P58304 AC091834.1-201ENST00000614543 472 ntBASIC1.68□□□□□ -2.14
VSX2P58304 AC005296.1-201ENST00000616145 209 ntBASIC1.68□□□□□ -2.14
VSX2P58304 AC009159.2-201ENST00000617603 606 ntBASIC1.68□□□□□ -2.14
VSX2P58304 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.68□□□□□ -2.14
VSX2P58304 AC131159.1-201ENST00000621854 213 ntBASIC1.68□□□□□ -2.14
VSX2P58304 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
VSX2P58304 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.67□□□□□ -2.14
VSX2P58304 AC131280.1-202ENST00000624067 4211 ntBASIC1.67□□□□□ -2.14
VSX2P58304 RNA5SP276-201ENST00000362580 94 ntBASIC1.67□□□□□ -2.14
VSX2P58304 MIR186-201ENST00000384988 86 ntBASIC1.67□□□□□ -2.14
VSX2P58304 RNA5SP213-201ENST00000391031 106 ntBASIC1.67□□□□□ -2.14
VSX2P58304 RPS3AP36-201ENST00000398190 775 ntBASIC1.67□□□□□ -2.14
VSX2P58304 RNU2-48P-201ENST00000410694 191 ntBASIC1.67□□□□□ -2.14
VSX2P58304 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VSX2P58304 UBE2V1P10-201ENST00000414685 269 ntBASIC1.67□□□□□ -2.14
VSX2P58304 RPL21P90-201ENST00000415692 466 ntBASIC1.67□□□□□ -2.14
VSX2P58304 AC138623.1-201ENST00000418060 216 ntBASIC1.67□□□□□ -2.14
VSX2P58304 AC137499.1-201ENST00000427602 88 ntBASIC1.67□□□□□ -2.14
VSX2P58304 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.67□□□□□ -2.14
VSX2P58304 AL136380.1-201ENST00000447970 162 ntBASIC1.67□□□□□ -2.14
VSX2P58304 MTCYBP1-201ENST00000454315 1119 ntBASIC1.67□□□□□ -2.14
VSX2P58304 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.67□□□□□ -2.14
VSX2P58304 MTCO2P29-201ENST00000465212 189 ntBASIC1.67□□□□□ -2.14
VSX2P58304 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.67□□□□□ -2.14
VSX2P58304 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.67□□□□□ -2.14
VSX2P58304 RNU2-53P-201ENST00000516257 147 ntBASIC1.67□□□□□ -2.14
VSX2P58304 SNORA25.15-201ENST00000516487 89 ntBASIC1.67□□□□□ -2.14
VSX2P58304 Y_RNA.687-201ENST00000516558 91 ntBASIC1.67□□□□□ -2.14
VSX2P58304 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.67□□□□□ -2.14
VSX2P58304 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.67□□□□□ -2.14
VSX2P58304 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.67□□□□□ -2.14
VSX2P58304 AC008015.1-201ENST00000555505 465 ntBASIC1.67□□□□□ -2.14
VSX2P58304 AC002400.1-201ENST00000569310 726 ntBASIC1.67□□□□□ -2.14
VSX2P58304 MIR3126-201ENST00000577443 74 ntBASIC1.67□□□□□ -2.14
VSX2P58304 MIR548AC-201ENST00000585049 88 ntBASIC1.67□□□□□ -2.14
VSX2P58304 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VSX2P58304 AL138889.2-201ENST00000603883 242 ntBASIC1.67□□□□□ -2.14
VSX2P58304 AL139286.2-201ENST00000606838 396 ntBASIC1.67□□□□□ -2.14
VSX2P58304 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
VSX2P58304 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.67□□□□□ -2.14
VSX2P58304 AL359740.1-201ENST00000624340 592 ntBASIC1.67□□□□□ -2.14
VSX2P58304 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.67□□□□□ -2.14
VSX2P58304 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
VSX2P58304 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
VSX2P58304 RNU6-641P-201ENST00000384006 107 ntBASIC1.66□□□□□ -2.14
VSX2P58304 RNU6-622P-201ENST00000384272 103 ntBASIC1.66□□□□□ -2.14
VSX2P58304 RNU1-57P-201ENST00000384491 166 ntBASIC1.66□□□□□ -2.14
VSX2P58304 SNORD116-20-201ENST00000384529 92 ntBASIC1.66□□□□□ -2.14
VSX2P58304 MIR561-201ENST00000385216 97 ntBASIC1.66□□□□□ -2.14
VSX2P58304 AL627390.1-201ENST00000396055 340 ntBASIC1.66□□□□□ -2.14
VSX2P58304 HMGN2P39-201ENST00000398005 273 ntBASIC1.66□□□□□ -2.14
VSX2P58304 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.66□□□□□ -2.14
VSX2P58304 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.66□□□□□ -2.14
VSX2P58304 MTND6P13-201ENST00000443510 523 ntBASIC1.66□□□□□ -2.14
VSX2P58304 NDUFB1P2-201ENST00000449477 176 ntBASIC1.66□□□□□ -2.14
VSX2P58304 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.66□□□□□ -2.14
VSX2P58304 CYP2C59P-201ENST00000457790 269 ntBASIC1.66□□□□□ -2.14
VSX2P58304 AC107032.1-201ENST00000485945 480 ntBASIC1.66□□□□□ -2.14
VSX2P58304 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.66□□□□□ -2.14
VSX2P58304 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.66□□□□□ -2.14
VSX2P58304 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.66□□□□□ -2.14
VSX2P58304 FABP5P5-201ENST00000515537 406 ntBASIC1.66□□□□□ -2.14
VSX2P58304 RN7SKP287-201ENST00000516546 266 ntBASIC1.66□□□□□ -2.14
VSX2P58304 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.66□□□□□ -2.14
VSX2P58304 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.66□□□□□ -2.14
VSX2P58304 AC093249.1-201ENST00000567049 203 ntBASIC1.66□□□□□ -2.14
VSX2P58304 MIR4529-201ENST00000578110 78 ntBASIC1.66□□□□□ -2.14
VSX2P58304 AC093424.1-201ENST00000604999 338 ntBASIC1.66□□□□□ -2.14
VSX2P58304 AL670379.4-201ENST00000605279 254 ntBASIC1.66□□□□□ -2.14
VSX2P58304 AC098614.4-201ENST00000607601 462 ntBASIC1.66□□□□□ -2.14
VSX2P58304 U6.42-201ENST00000618440 107 ntBASIC1.66□□□□□ -2.14
VSX2P58304 AC093648.1-201ENST00000623546 606 ntBASIC1.66□□□□□ -2.14
VSX2P58304 AP003400.5-201ENST00000624827 617 ntBASIC1.66□□□□□ -2.14
VSX2P58304 AC008555.8-201ENST00000623602 2168 ntBASIC1.66□□□□□ -2.14
VSX2P58304 MTND4P4-201ENST00000439033 1366 ntBASIC1.65□□□□□ -2.15
VSX2P58304 RNA5SP240-201ENST00000365355 128 ntBASIC1.65□□□□□ -2.15
VSX2P58304 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms