Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 RPS15AP27-201ENST00000449183 343 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 RPL7P43-201ENST00000478876 753 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 RPL30P5-201ENST00000494923 336 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 AC074198.2-201ENST00000508153 258 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.67□□□□□ -1.82
ATXN1P54253 SCARNA15.2-201ENST00000516409 127 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 RNU6-699P-201ENST00000517081 110 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATXN1P54253 AP000763.2-201ENST00000540641 163 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.67□□□□□ -1.82
ATXN1P54253 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.67□□□□□ -1.82
ATXN1P54253 AC012433.1-201ENST00000588916 398 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 BNIP3P25-201ENST00000596023 559 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.67□□□□□ -1.82
ATXN1P54253 AC006557.5-201ENST00000603126 811 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 AC092747.3-201ENST00000603769 301 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 AL022345.1-201ENST00000607292 135 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 SNORD58B-201ENST00000607313 66 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATXN1P54253 MIR7112-201ENST00000616126 65 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 AC027309.3-201ENST00000623419 351 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.67□□□□□ -1.82
ATXN1P54253 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.67□□□□□ -1.82
ATXN1P54253 AL669831.3-213ENST00000636676 183 ntBASIC3.67□□□□□ -1.82
ATXN1P54253 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATXN1P54253 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATXN1P54253 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATXN1P54253 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATXN1P54253 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
ATXN1P54253 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATXN1P54253 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.66□□□□□ -1.82
ATXN1P54253 RNU1-101P-201ENST00000391171 127 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 RNU6-101P-201ENST00000410323 104 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 POLHP1-201ENST00000411806 470 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 AC074085.1-201ENST00000413598 418 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 AC099799.1-201ENST00000439809 192 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 RPL21P13-201ENST00000488305 481 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 SNORA31.3-201ENST00000516029 96 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 Y_RNA.683-201ENST00000516508 93 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 SNORD59.2-201ENST00000516873 68 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 AC026333.2-201ENST00000542164 106 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.66□□□□□ -1.82
ATXN1P54253 AC009779.6-201ENST00000603972 165 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 AC013412.1-201ENST00000610687 192 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 AC090132.2-201ENST00000615881 347 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.66□□□□□ -1.82
ATXN1P54253 AC244205.2-202ENST00000635781 342 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 AC068647.1-201ENST00000489539 2265 ntBASIC3.66□□□□□ -1.82
ATXN1P54253 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATXN1P54253 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATXN1P54253 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATXN1P54253 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATXN1P54253 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ATXN1P54253 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ATXN1P54253 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATXN1P54253 Y_RNA.64-201ENST00000362845 102 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 Y_RNA.167-201ENST00000363735 109 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 Y_RNA.170-201ENST00000363746 110 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 SNORD27-201ENST00000363981 72 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 RNU6-44P-201ENST00000384045 107 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 RNU6-1013P-201ENST00000384180 107 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 SNORD20-201ENST00000384550 80 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.65□□□□□ -1.83
ATXN1P54253 AL139039.1-201ENST00000401900 692 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.65□□□□□ -1.83
ATXN1P54253 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.65□□□□□ -1.83
ATXN1P54253 AC006989.1-201ENST00000427212 131 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.65□□□□□ -1.83
ATXN1P54253 OSTCP8-201ENST00000445117 448 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.65□□□□□ -1.83
ATXN1P54253 AL139109.1-201ENST00000455491 297 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 KC877373.1-201ENST00000479066 408 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 AC006445.2-201ENST00000510061 472 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 RNU6-1256P-201ENST00000516539 103 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 CASP1P1-201ENST00000526345 212 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 AP002770.2-201ENST00000543613 532 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.65□□□□□ -1.83
ATXN1P54253 IMMP1LP2-201ENST00000552954 492 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.65□□□□□ -1.83
ATXN1P54253 OR11H5P-201ENST00000554039 926 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATXN1P54253 MIR4672-201ENST00000583126 81 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATXN1P54253 AL162274.2-201ENST00000614406 332 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.65□□□□□ -1.83
ATXN1P54253 AC121333.1-201ENST00000567488 2709 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATXN1P54253 AC005183.1-201ENST00000603687 1979 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATXN1P54253 FAM35BP-202ENST00000497389 3337 ntBASIC3.65□□□□□ -1.83
ATXN1P54253 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATXN1P54253 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.83
ATXN1P54253 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
ATXN1P54253 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
ATXN1P54253 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ATXN1P54253 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATXN1P54253 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.64□□□□□ -1.83
ATXN1P54253 Y_RNA.29-201ENST00000362570 113 ntBASIC3.64□□□□□ -1.83
ATXN1P54253 RNA5SP374-201ENST00000362939 125 ntBASIC3.64□□□□□ -1.83
ATXN1P54253 RNU6-280P-201ENST00000364145 104 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms