Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC100810.6-201ENST00000638068 285 ntBASIC3.22□□□□□ -1.89
NEK3P51956 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.22□□□□□ -1.89
NEK3P51956 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.22□□□□□ -1.89
NEK3P51956 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NEK3P51956 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
NEK3P51956 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NEK3P51956 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NEK3P51956 AL353743.1-202ENST00000431724 1695 ntBASIC3.21□□□□□ -1.9
NEK3P51956 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.21□□□□□ -1.9
NEK3P51956 MTND5P19-201ENST00000424872 1794 ntBASIC3.21□□□□□ -1.9
NEK3P51956 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.21□□□□□ -1.9
NEK3P51956 Y_RNA.212-201ENST00000364177 102 ntBASIC3.21□□□□□ -1.9
NEK3P51956 RNU6-827P-201ENST00000365553 106 ntBASIC3.21□□□□□ -1.9
NEK3P51956 RNU6-1013P-201ENST00000384180 107 ntBASIC3.21□□□□□ -1.9
NEK3P51956 AC245054.2-201ENST00000415639 319 ntBASIC3.21□□□□□ -1.9
NEK3P51956 AL513185.2-201ENST00000425543 193 ntBASIC3.21□□□□□ -1.9
NEK3P51956 UBBP3-201ENST00000445497 241 ntBASIC3.21□□□□□ -1.9
NEK3P51956 snoU13.14-201ENST00000459372 104 ntBASIC3.21□□□□□ -1.9
NEK3P51956 AC112771.1-201ENST00000463581 102 ntBASIC3.21□□□□□ -1.9
NEK3P51956 RPS29P2-201ENST00000479278 136 ntBASIC3.21□□□□□ -1.9
NEK3P51956 RPL23AP70-201ENST00000483361 460 ntBASIC3.21□□□□□ -1.9
NEK3P51956 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.21□□□□□ -1.9
NEK3P51956 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.21□□□□□ -1.9
NEK3P51956 RNA5SP385-201ENST00000515947 110 ntBASIC3.21□□□□□ -1.9
NEK3P51956 RN7SKP256-201ENST00000517201 314 ntBASIC3.21□□□□□ -1.9
NEK3P51956 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.21□□□□□ -1.9
NEK3P51956 AC105245.1-201ENST00000581934 244 ntBASIC3.21□□□□□ -1.9
NEK3P51956 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NEK3P51956 uc_338.25-201ENST00000613756 156 ntBASIC3.21□□□□□ -1.9
NEK3P51956 AC093913.1-201ENST00000614178 329 ntBASIC3.21□□□□□ -1.9
NEK3P51956 FAM157A-202ENST00000615155 405 ntBASIC3.21□□□□□ -1.9
NEK3P51956 AC018692.3-201ENST00000623929 123 ntBASIC3.21□□□□□ -1.9
NEK3P51956 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.21□□□□□ -1.9
NEK3P51956 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NEK3P51956 RNU6-529P-201ENST00000363383 104 ntBASIC3.2□□□□□ -1.9
NEK3P51956 SNORD56.5-201ENST00000364281 72 ntBASIC3.2□□□□□ -1.9
NEK3P51956 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NEK3P51956 RNU1-57P-201ENST00000384491 166 ntBASIC3.2□□□□□ -1.9
NEK3P51956 RNU6-1222P-201ENST00000384615 107 ntBASIC3.2□□□□□ -1.9
NEK3P51956 MIR128-1-201ENST00000384921 82 ntBASIC3.2□□□□□ -1.9
NEK3P51956 SNORA48.2-201ENST00000390926 124 ntBASIC3.2□□□□□ -1.9
NEK3P51956 SNORA48.5-201ENST00000391143 135 ntBASIC3.2□□□□□ -1.9
NEK3P51956 RNU6-510P-201ENST00000391239 108 ntBASIC3.2□□□□□ -1.9
NEK3P51956 VN1R36P-201ENST00000414936 291 ntBASIC3.2□□□□□ -1.9
NEK3P51956 AL139413.1-201ENST00000421309 217 ntBASIC3.2□□□□□ -1.9
NEK3P51956 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.2□□□□□ -1.9
NEK3P51956 AC244505.4-201ENST00000434905 287 ntBASIC3.2□□□□□ -1.9
NEK3P51956 AL445687.1-201ENST00000439946 251 ntBASIC3.2□□□□□ -1.9
NEK3P51956 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.2□□□□□ -1.9
NEK3P51956 SSXP5-201ENST00000443473 287 ntBASIC3.2□□□□□ -1.9
NEK3P51956 AC069439.1-201ENST00000494739 167 ntBASIC3.2□□□□□ -1.9
NEK3P51956 AC008628.2-201ENST00000502605 298 ntBASIC3.2□□□□□ -1.9
NEK3P51956 PRDX4P1-201ENST00000507189 574 ntBASIC3.2□□□□□ -1.9
NEK3P51956 AC023141.11-201ENST00000508864 202 ntBASIC3.2□□□□□ -1.9
NEK3P51956 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.2□□□□□ -1.9
NEK3P51956 RN7SKP40-201ENST00000517211 242 ntBASIC3.2□□□□□ -1.9
NEK3P51956 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.2□□□□□ -1.9
NEK3P51956 AC115990.1-201ENST00000526957 301 ntBASIC3.2□□□□□ -1.9
NEK3P51956 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.2□□□□□ -1.9
NEK3P51956 AP001094.1-201ENST00000579805 193 ntBASIC3.2□□□□□ -1.9
NEK3P51956 MIR3199-1-201ENST00000582434 88 ntBASIC3.2□□□□□ -1.9
NEK3P51956 MIR3117-201ENST00000584034 78 ntBASIC3.2□□□□□ -1.9
NEK3P51956 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.2□□□□□ -1.9
NEK3P51956 AC073410.2-201ENST00000603240 332 ntBASIC3.2□□□□□ -1.9
NEK3P51956 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.2□□□□□ -1.9
NEK3P51956 AC009033.1-201ENST00000624279 431 ntBASIC3.2□□□□□ -1.9
NEK3P51956 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NEK3P51956 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NEK3P51956 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
NEK3P51956 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.19□□□□□ -1.9
NEK3P51956 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NEK3P51956 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NEK3P51956 RNU6-428P-201ENST00000362942 107 ntBASIC3.19□□□□□ -1.9
NEK3P51956 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NEK3P51956 SNORA7.4-201ENST00000384249 137 ntBASIC3.19□□□□□ -1.9
NEK3P51956 AL133475.1-201ENST00000404414 305 ntBASIC3.19□□□□□ -1.9
NEK3P51956 RNA5SP492-201ENST00000411330 114 ntBASIC3.19□□□□□ -1.9
NEK3P51956 AC096664.2-201ENST00000411843 406 ntBASIC3.19□□□□□ -1.9
NEK3P51956 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.19□□□□□ -1.9
NEK3P51956 RPL30P4-201ENST00000429309 333 ntBASIC3.19□□□□□ -1.9
NEK3P51956 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.19□□□□□ -1.9
NEK3P51956 AL645568.3-201ENST00000433683 316 ntBASIC3.19□□□□□ -1.9
NEK3P51956 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.19□□□□□ -1.9
NEK3P51956 RBMX2P4-201ENST00000441256 376 ntBASIC3.19□□□□□ -1.9
NEK3P51956 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.19□□□□□ -1.9
NEK3P51956 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.19□□□□□ -1.9
NEK3P51956 AC096576.1-201ENST00000489014 359 ntBASIC3.19□□□□□ -1.9
NEK3P51956 AC114801.2-201ENST00000503825 781 ntBASIC3.19□□□□□ -1.9
NEK3P51956 RNU6-256P-201ENST00000516747 97 ntBASIC3.19□□□□□ -1.9
NEK3P51956 AC109329.2-201ENST00000519658 482 ntBASIC3.19□□□□□ -1.9
NEK3P51956 AC026371.1-201ENST00000551867 419 ntBASIC3.19□□□□□ -1.9
NEK3P51956 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.19□□□□□ -1.9
NEK3P51956 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.19□□□□□ -1.9
NEK3P51956 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.19□□□□□ -1.9
NEK3P51956 CTHRC1P1-201ENST00000605383 469 ntBASIC3.19□□□□□ -1.9
NEK3P51956 AL022345.1-201ENST00000607292 135 ntBASIC3.19□□□□□ -1.9
NEK3P51956 AL162274.2-201ENST00000614406 332 ntBASIC3.19□□□□□ -1.9
NEK3P51956 uc_338.15-201ENST00000615470 191 ntBASIC3.19□□□□□ -1.9
NEK3P51956 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NEK3P51956 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms