Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 MTCO1P29-201ENST00000496868 288 ntBASIC2.23□□□□□ -2.05
ATRXP46100 MTND5P5-201ENST00000503764 376 ntBASIC2.23□□□□□ -2.05
ATRXP46100 AC026436.1-201ENST00000510537 270 ntBASIC2.23□□□□□ -2.05
ATRXP46100 SNORA31.1-201ENST00000515993 133 ntBASIC2.23□□□□□ -2.05
ATRXP46100 RNU6-189P-201ENST00000516120 101 ntBASIC2.23□□□□□ -2.05
ATRXP46100 SNORA31.5-201ENST00000516190 133 ntBASIC2.23□□□□□ -2.05
ATRXP46100 Y_RNA.689-201ENST00000516589 107 ntBASIC2.23□□□□□ -2.05
ATRXP46100 AC105029.1-201ENST00000520250 669 ntBASIC2.23□□□□□ -2.05
ATRXP46100 AC068657.1-201ENST00000520807 306 ntBASIC2.23□□□□□ -2.05
ATRXP46100 FRG2DP-202ENST00000566967 323 ntBASIC2.23□□□□□ -2.05
ATRXP46100 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.23□□□□□ -2.05
ATRXP46100 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ATRXP46100 OR4G1P-203ENST00000641984 1631 ntBASIC2.23□□□□□ -2.05
ATRXP46100 AP001350.1-201ENST00000601906 1524 ntBASIC2.23□□□□□ -2.05
ATRXP46100 MIR135A2-201ENST00000384854 100 ntBASIC2.23□□□□□ -2.05
ATRXP46100 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ATRXP46100 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ATRXP46100 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ATRXP46100 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ATRXP46100 Z85995.1-201ENST00000415547 335 ntBASIC2.23□□□□□ -2.05
ATRXP46100 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.23□□□□□ -2.05
ATRXP46100 RNU6-1208P-201ENST00000459588 107 ntBASIC2.23□□□□□ -2.05
ATRXP46100 RPL23AP45-201ENST00000476406 468 ntBASIC2.23□□□□□ -2.05
ATRXP46100 Y_RNA.661-201ENST00000516003 99 ntBASIC2.23□□□□□ -2.05
ATRXP46100 SNORA64.4-201ENST00000516632 81 ntBASIC2.23□□□□□ -2.05
ATRXP46100 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.23□□□□□ -2.05
ATRXP46100 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.23□□□□□ -2.05
ATRXP46100 SUB1P2-201ENST00000556401 297 ntBASIC2.23□□□□□ -2.05
ATRXP46100 MED28P6-201ENST00000558776 231 ntBASIC2.23□□□□□ -2.05
ATRXP46100 RPL23AP84-201ENST00000571193 464 ntBASIC2.23□□□□□ -2.05
ATRXP46100 AC093838.1-201ENST00000613014 469 ntBASIC2.23□□□□□ -2.05
ATRXP46100 WWP1P1-201ENST00000466609 2769 ntBASIC2.22□□□□□ -2.05
ATRXP46100 AC022336.2-201ENST00000568966 2538 ntBASIC2.22□□□□□ -2.05
ATRXP46100 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
ATRXP46100 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ATRXP46100 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.22□□□□□ -2.05
ATRXP46100 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
ATRXP46100 RNU4-79P-201ENST00000362764 141 ntBASIC2.22□□□□□ -2.05
ATRXP46100 RNU4-66P-201ENST00000365199 138 ntBASIC2.22□□□□□ -2.05
ATRXP46100 RNU6-1148P-201ENST00000410992 104 ntBASIC2.22□□□□□ -2.05
ATRXP46100 RNU6-387P-201ENST00000411331 105 ntBASIC2.22□□□□□ -2.05
ATRXP46100 RNU6-1304P-201ENST00000411374 106 ntBASIC2.22□□□□□ -2.05
ATRXP46100 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.22□□□□□ -2.05
ATRXP46100 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.22□□□□□ -2.05
ATRXP46100 SNORD97-201ENST00000459187 142 ntBASIC2.22□□□□□ -2.05
ATRXP46100 TTC39CP1-201ENST00000512513 755 ntBASIC2.22□□□□□ -2.05
ATRXP46100 SNORA14.1-201ENST00000516113 141 ntBASIC2.22□□□□□ -2.05
ATRXP46100 RNU2-10P-201ENST00000516375 211 ntBASIC2.22□□□□□ -2.05
ATRXP46100 AP005597.4-201ENST00000526762 229 ntBASIC2.22□□□□□ -2.05
ATRXP46100 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.22□□□□□ -2.05
ATRXP46100 AL031274.2-201ENST00000599419 203 ntBASIC2.22□□□□□ -2.05
ATRXP46100 AL022099.1-201ENST00000604551 712 ntBASIC2.22□□□□□ -2.05
ATRXP46100 PART1_1.1-201ENST00000611761 217 ntBASIC2.22□□□□□ -2.05
ATRXP46100 AC133104.2-201ENST00000615272 193 ntBASIC2.22□□□□□ -2.05
ATRXP46100 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.22□□□□□ -2.05
ATRXP46100 Y_RNA.39-201ENST00000362620 98 ntBASIC2.22□□□□□ -2.05
ATRXP46100 RNU6-254P-201ENST00000363377 107 ntBASIC2.22□□□□□ -2.05
ATRXP46100 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.22□□□□□ -2.05
ATRXP46100 RPL32P35-201ENST00000415214 394 ntBASIC2.22□□□□□ -2.05
ATRXP46100 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.22□□□□□ -2.05
ATRXP46100 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.22□□□□□ -2.05
ATRXP46100 AC079780.1-201ENST00000428259 207 ntBASIC2.22□□□□□ -2.05
ATRXP46100 RPL35AP22-201ENST00000436855 335 ntBASIC2.22□□□□□ -2.05
ATRXP46100 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.22□□□□□ -2.05
ATRXP46100 SNORD108-201ENST00000459332 71 ntBASIC2.22□□□□□ -2.05
ATRXP46100 RNU6-329P-201ENST00000459618 107 ntBASIC2.22□□□□□ -2.05
ATRXP46100 RPL23AP49-201ENST00000492925 468 ntBASIC2.22□□□□□ -2.05
ATRXP46100 RNU6-327P-201ENST00000516270 127 ntBASIC2.22□□□□□ -2.05
ATRXP46100 AL118558.2-201ENST00000556294 238 ntBASIC2.22□□□□□ -2.05
ATRXP46100 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.22□□□□□ -2.05
ATRXP46100 AC064836.2-201ENST00000609491 462 ntBASIC2.22□□□□□ -2.05
ATRXP46100 AC002550.2-201ENST00000621246 394 ntBASIC2.22□□□□□ -2.05
ATRXP46100 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.21□□□□□ -2.06
ATRXP46100 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
ATRXP46100 AC138393.1-203ENST00000327086 343 ntBASIC2.21□□□□□ -2.06
ATRXP46100 Y_RNA.373-201ENST00000365600 103 ntBASIC2.21□□□□□ -2.06
ATRXP46100 EI24P1-201ENST00000416584 867 ntBASIC2.21□□□□□ -2.06
ATRXP46100 PDCL2P1-201ENST00000419302 352 ntBASIC2.21□□□□□ -2.06
ATRXP46100 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.21□□□□□ -2.06
ATRXP46100 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.21□□□□□ -2.06
ATRXP46100 RPL21P93-201ENST00000480465 489 ntBASIC2.21□□□□□ -2.06
ATRXP46100 RNU6-1170P-201ENST00000515974 106 ntBASIC2.21□□□□□ -2.06
ATRXP46100 AP003072.1-201ENST00000531740 145 ntBASIC2.21□□□□□ -2.06
ATRXP46100 AC022882.1-201ENST00000532142 501 ntBASIC2.21□□□□□ -2.06
ATRXP46100 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.21□□□□□ -2.06
ATRXP46100 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.21□□□□□ -2.06
ATRXP46100 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.21□□□□□ -2.06
ATRXP46100 AC093913.1-201ENST00000614178 329 ntBASIC2.21□□□□□ -2.06
ATRXP46100 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.21□□□□□ -2.06
ATRXP46100 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.21□□□□□ -2.06
ATRXP46100 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.21□□□□□ -2.06
ATRXP46100 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.21□□□□□ -2.06
ATRXP46100 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.21□□□□□ -2.06
ATRXP46100 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.21□□□□□ -2.06
ATRXP46100 API5P2-201ENST00000397055 1498 ntBASIC2.21□□□□□ -2.06
ATRXP46100 AC010680.1-201ENST00000590024 3590 ntBASIC2.21□□□□□ -2.06
ATRXP46100 SNORA4.3-201ENST00000365564 137 ntBASIC2.2□□□□□ -2.06
ATRXP46100 MIR450B-201ENST00000401182 78 ntBASIC2.2□□□□□ -2.06
ATRXP46100 RPL30P2-201ENST00000414021 291 ntBASIC2.2□□□□□ -2.06
ATRXP46100 MED13P1-201ENST00000428342 171 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms