Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 Y_RNA.11-201ENST00000362375 109 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 Y_RNA.184-201ENST00000363884 108 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 RNU6-1077P-201ENST00000410506 102 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 RNU6-607P-201ENST00000411283 108 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 VN1R36P-201ENST00000414936 291 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.38□□□□□ -1.87
COL15A1P39059 AL353621.1-201ENST00000418219 243 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.38□□□□□ -1.87
COL15A1P39059 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.38□□□□□ -1.87
COL15A1P39059 AC117503.1-201ENST00000472241 394 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 AC132942.1-201ENST00000486753 483 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.38□□□□□ -1.87
COL15A1P39059 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.38□□□□□ -1.87
COL15A1P39059 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.38□□□□□ -1.87
COL15A1P39059 MIR892C-201ENST00000516410 77 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 Y_RNA.682-201ENST00000516457 100 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 RNU6-1069P-201ENST00000516612 133 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 SNORD59.2-201ENST00000516873 68 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 SNORD53-201ENST00000579969 78 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 AL132765.2-201ENST00000610812 351 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 AC009233.1-201ENST00000616477 371 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 AL133216.2-202ENST00000634512 349 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 U6.99-201ENST00000637524 83 ntBASIC3.38□□□□□ -1.87
COL15A1P39059 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
COL15A1P39059 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL15A1P39059 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.37□□□□□ -1.87
COL15A1P39059 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL15A1P39059 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
COL15A1P39059 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.37□□□□□ -1.87
COL15A1P39059 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.37□□□□□ -1.87
COL15A1P39059 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
COL15A1P39059 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
COL15A1P39059 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
COL15A1P39059 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.37□□□□□ -1.87
COL15A1P39059 AC022336.2-201ENST00000568966 2538 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL15A1P39059 Y_RNA.301-201ENST00000364990 103 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 RNU6-217P-201ENST00000384164 104 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 SNORA3.2-201ENST00000408221 125 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL15A1P39059 AL513477.1-202ENST00000417061 214 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 AL139396.1-201ENST00000421137 167 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 AL590664.1-201ENST00000448065 339 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 AL583843.1-201ENST00000456070 346 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 AC087884.1-201ENST00000469738 328 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 RPL7P43-201ENST00000478876 753 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 RPL39P5-202ENST00000512505 151 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 RNA5SP320-201ENST00000516263 124 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 RNU6-1332P-201ENST00000516666 104 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 RNU6-572P-201ENST00000516724 80 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 SNORA31.19-201ENST00000517079 126 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 AC087854.1-201ENST00000519706 414 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.37□□□□□ -1.87
COL15A1P39059 LRRC37A5P-203ENST00000580181 585 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.37□□□□□ -1.87
COL15A1P39059 AC005046.1-201ENST00000608515 625 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 FTX_3.1-201ENST00000610451 147 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.37□□□□□ -1.87
COL15A1P39059 MIR1302-1-201ENST00000637932 143 ntBASIC3.37□□□□□ -1.87
COL15A1P39059 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL15A1P39059 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
COL15A1P39059 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL15A1P39059 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL15A1P39059 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL15A1P39059 RNA5SP289-201ENST00000362332 137 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 SNORD62.1-201ENST00000362541 86 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 SNORD3E-201ENST00000362899 217 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.36□□□□□ -1.87
COL15A1P39059 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.36□□□□□ -1.87
COL15A1P39059 AMD1P1-201ENST00000457220 922 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 MTCO1P29-201ENST00000496868 288 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.36□□□□□ -1.87
COL15A1P39059 FGF7P4-201ENST00000509595 295 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 SNORA31.1-201ENST00000515993 133 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 SNORA31.5-201ENST00000516190 133 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 AC009902.1-201ENST00000519351 183 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 AC093331.1-201ENST00000521474 169 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.36□□□□□ -1.87
COL15A1P39059 MIR4795-201ENST00000584182 89 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 MIR3672-201ENST00000584290 82 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.36□□□□□ -1.87
COL15A1P39059 CTSLP2-204ENST00000629029 392 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 ZNF658B-202ENST00000615961 3375 ntBASIC3.36□□□□□ -1.87
COL15A1P39059 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL15A1P39059 Y_RNA.324-201ENST00000365165 102 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 RNU6-214P-201ENST00000384130 107 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 Y_RNA.623-201ENST00000411128 95 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 HMGN2P30-201ENST00000423237 256 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 UBE2V1P7-201ENST00000446395 340 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 AC107399.1-201ENST00000451226 265 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 AC104472.2-201ENST00000469035 601 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 RNU6-566P-201ENST00000516790 107 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 RNU6-1088P-201ENST00000516850 104 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 RNU6-928P-201ENST00000516876 104 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 SNORA25.17-201ENST00000517184 124 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.35□□□□□ -1.87
COL15A1P39059 AP002770.2-201ENST00000543613 532 ntBASIC3.35□□□□□ -1.87
COL15A1P39059 AC025423.5-201ENST00000550230 219 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms