Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 Y_RNA.20-201ENST00000362479 113 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 Y_RNA.180-201ENST00000363867 113 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 Y_RNA.462-201ENST00000384268 102 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 Y_RNA.478-201ENST00000384358 107 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 RNU1-89P-201ENST00000384592 164 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.33□□□□□ -1.72
PDE6BP35913 PPP1R11P2-201ENST00000423543 382 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 AL356867.1-201ENST00000429623 299 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.33□□□□□ -1.72
PDE6BP35913 Z75741.1-201ENST00000446793 314 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 OR2AQ1P-201ENST00000451972 200 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 PCMTD1P1-201ENST00000455560 355 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 LINC01399-202ENST00000458450 244 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 RPL21P41-201ENST00000459863 264 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 RPL27AP5-201ENST00000469428 449 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 HMGB1P35-201ENST00000503360 598 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.33□□□□□ -1.72
PDE6BP35913 RNU6-570P-201ENST00000517051 105 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.33□□□□□ -1.72
PDE6BP35913 AC109329.1-201ENST00000518744 317 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.33□□□□□ -1.72
PDE6BP35913 AC009779.6-201ENST00000603972 165 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 AC104763.2-201ENST00000604179 382 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 AL162274.2-201ENST00000614406 332 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.33□□□□□ -1.72
PDE6BP35913 AL159153.1-201ENST00000619688 317 ntBASIC4.33□□□□□ -1.72
PDE6BP35913 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDE6BP35913 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDE6BP35913 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDE6BP35913 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDE6BP35913 RNA5SP322-201ENST00000363617 119 ntBASIC4.32□□□□□ -1.72
PDE6BP35913 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.32□□□□□ -1.72
PDE6BP35913 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.32□□□□□ -1.72
PDE6BP35913 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.32□□□□□ -1.72
PDE6BP35913 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.32□□□□□ -1.72
PDE6BP35913 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.32□□□□□ -1.72
PDE6BP35913 RPL21P13-201ENST00000488305 481 ntBASIC4.32□□□□□ -1.72
PDE6BP35913 AC018437.1-201ENST00000492214 406 ntBASIC4.32□□□□□ -1.72
PDE6BP35913 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.32□□□□□ -1.72
PDE6BP35913 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.32□□□□□ -1.72
PDE6BP35913 SNORA31.3-201ENST00000516029 96 ntBASIC4.32□□□□□ -1.72
PDE6BP35913 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.32□□□□□ -1.72
PDE6BP35913 MIR4276-201ENST00000584832 70 ntBASIC4.32□□□□□ -1.72
PDE6BP35913 AC010900.2-201ENST00000604508 210 ntBASIC4.32□□□□□ -1.72
PDE6BP35913 RNU6-85P-201ENST00000605989 107 ntBASIC4.32□□□□□ -1.72
PDE6BP35913 MFSD8-233ENST00000641482 4860 ntBASIC4.32□□□□□ -1.72
PDE6BP35913 HSPA8P1-201ENST00000425843 1833 ntBASIC4.32□□□□□ -1.72
PDE6BP35913 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDE6BP35913 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDE6BP35913 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDE6BP35913 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PDE6BP35913 AL356274.2-201ENST00000624379 3752 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 AC008568.2-201ENST00000623862 2313 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 RNY1P16-201ENST00000363063 111 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 Y_RNA.480-201ENST00000384364 102 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 MTCO2P33-201ENST00000402100 465 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 U3.42-201ENST00000408746 214 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 RNU2-33P-201ENST00000410344 192 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 RNU6-130P-201ENST00000411112 103 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 AL030996.1-201ENST00000411430 235 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 RPL21P38-201ENST00000418090 167 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 COTL1P1-201ENST00000422309 375 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.31□□□□□ -1.72
PDE6BP35913 AL360271.2-201ENST00000447710 161 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 ANP32BP2-201ENST00000454525 545 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 RNU6-677P-201ENST00000516914 101 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 AP003733.2-201ENST00000529409 171 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.31□□□□□ -1.72
PDE6BP35913 VN1R91P-201ENST00000594377 169 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 AL451007.1-201ENST00000595491 289 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 AC006557.5-201ENST00000603126 811 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 AC130454.1-201ENST00000622948 401 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.31□□□□□ -1.72
PDE6BP35913 AL035425.3-201ENST00000564206 4996 ntBASIC4.31□□□□□ -1.72
PDE6BP35913 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
PDE6BP35913 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PDE6BP35913 CEP170P1-201ENST00000502249 4587 ntBASIC4.3□□□□□ -1.72
PDE6BP35913 AC022336.2-201ENST00000568966 2538 ntBASIC4.3□□□□□ -1.72
PDE6BP35913 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
PDE6BP35913 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDE6BP35913 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PDE6BP35913 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDE6BP35913 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PDE6BP35913 RNU6-338P-201ENST00000383888 105 ntBASIC4.3□□□□□ -1.72
PDE6BP35913 Y_RNA.416-201ENST00000384014 113 ntBASIC4.3□□□□□ -1.72
PDE6BP35913 SNORA51.11-201ENST00000384442 131 ntBASIC4.3□□□□□ -1.72
PDE6BP35913 AP000275.1-201ENST00000411943 390 ntBASIC4.3□□□□□ -1.72
PDE6BP35913 NDUFB4P7-201ENST00000423198 363 ntBASIC4.3□□□□□ -1.72
PDE6BP35913 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.3□□□□□ -1.72
PDE6BP35913 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.3□□□□□ -1.72
PDE6BP35913 PRELID3BP1-201ENST00000457142 540 ntBASIC4.3□□□□□ -1.72
PDE6BP35913 RNU7-169P-201ENST00000459456 61 ntBASIC4.3□□□□□ -1.72
PDE6BP35913 TRBVB-201ENST00000477100 408 ntBASIC4.3□□□□□ -1.72
PDE6BP35913 MTND3P25-201ENST00000509243 135 ntBASIC4.3□□□□□ -1.72
PDE6BP35913 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.3□□□□□ -1.72
PDE6BP35913 AC113155.1-201ENST00000511141 769 ntBASIC4.3□□□□□ -1.72
PDE6BP35913 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.3□□□□□ -1.72
PDE6BP35913 RNU6-182P-201ENST00000516970 105 ntBASIC4.3□□□□□ -1.72
PDE6BP35913 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.3□□□□□ -1.72
PDE6BP35913 AC130289.1-201ENST00000577321 73 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms