Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL135786.1-201ENST00000415892 214 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.12□□□□□ -2.07
PTPN6P29350 HMGB1P31-201ENST00000437242 427 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.12□□□□□ -2.07
PTPN6P29350 GPM6BP3-201ENST00000442797 145 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 AC079448.1-201ENST00000449377 373 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 RPS29P15-201ENST00000458329 171 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.12□□□□□ -2.07
PTPN6P29350 AC104136.1-201ENST00000512969 394 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 RNA5SP281-201ENST00000516504 135 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 SNORA43.2-201ENST00000516652 128 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 RNU6-445P-201ENST00000516949 107 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.12□□□□□ -2.07
PTPN6P29350 AC073539.2-201ENST00000597113 165 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 RPL30P11-203ENST00000598995 310 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.12□□□□□ -2.07
PTPN6P29350 AC068790.2-201ENST00000602601 557 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 AC009831.4-201ENST00000620744 325 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 MIR3974-201ENST00000637126 96 ntBASIC2.12□□□□□ -2.07
PTPN6P29350 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.12□□□□□ -2.07
PTPN6P29350 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PTPN6P29350 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PTPN6P29350 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PTPN6P29350 RNU4-48P-201ENST00000365559 182 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 RNU6-1029P-201ENST00000384109 107 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 RNU6-45P-201ENST00000384471 107 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 AC090960.1-201ENST00000421072 306 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.11□□□□□ -2.07
PTPN6P29350 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.11□□□□□ -2.07
PTPN6P29350 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.11□□□□□ -2.07
PTPN6P29350 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.11□□□□□ -2.07
PTPN6P29350 AL596276.1-201ENST00000434465 418 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.11□□□□□ -2.07
PTPN6P29350 RPS27P21-201ENST00000486977 252 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 AC074344.1-201ENST00000512823 224 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.11□□□□□ -2.07
PTPN6P29350 RNU6-1178P-201ENST00000516674 107 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 RNA5SP137-201ENST00000516833 135 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 RNU2-19P-201ENST00000517288 84 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 BNIP3P6-201ENST00000549284 499 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.11□□□□□ -2.07
PTPN6P29350 AC009063.1-201ENST00000563342 702 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.11□□□□□ -2.07
PTPN6P29350 AL713866.2-201ENST00000603579 219 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 AC087752.4-201ENST00000605911 462 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 AC008945.2-201ENST00000606056 604 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 uc_338.15-201ENST00000615470 191 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 RMST_4.1-201ENST00000616886 107 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 Z69908.1-201ENST00000622603 247 ntBASIC2.11□□□□□ -2.07
PTPN6P29350 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.11□□□□□ -2.07
PTPN6P29350 ELL2P3-201ENST00000457883 1602 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PTPN6P29350 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PTPN6P29350 RNY3P9-201ENST00000384727 106 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 MIR17-201ENST00000385012 84 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 MIR95-201ENST00000385072 81 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 SNORA40.19-201ENST00000390846 128 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 RNA5SP425-201ENST00000410336 112 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.1□□□□□ -2.07
PTPN6P29350 EDDM3CP-201ENST00000415977 425 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 AC074117.2-201ENST00000417130 397 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 WARS2P1-201ENST00000429678 537 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 AL358934.1-201ENST00000432346 324 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 MTND2P4-201ENST00000445034 1004 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 USP9YP29-201ENST00000445112 563 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.1□□□□□ -2.07
PTPN6P29350 RNU6-956P-201ENST00000458868 103 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 AC006512.1-201ENST00000468816 291 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 AC055731.1-201ENST00000474387 401 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 AC107032.1-201ENST00000485945 480 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 ARL2BPP4-201ENST00000506854 471 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.1□□□□□ -2.07
PTPN6P29350 AC010486.3-201ENST00000511602 785 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 RNU2-53P-201ENST00000516257 147 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.1□□□□□ -2.07
PTPN6P29350 AC109329.1-201ENST00000518744 317 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.1□□□□□ -2.07
PTPN6P29350 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.1□□□□□ -2.07
PTPN6P29350 AP002963.1-201ENST00000530590 184 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 SUB1P2-201ENST00000556401 297 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.1□□□□□ -2.07
PTPN6P29350 AL391840.1-201ENST00000571144 367 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.1□□□□□ -2.07
PTPN6P29350 AC098614.4-201ENST00000607601 462 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 AC097520.1-201ENST00000624435 385 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 AC009161.2-201ENST00000624626 138 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 AC008555.8-201ENST00000623602 2168 ntBASIC2.1□□□□□ -2.07
PTPN6P29350 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
PTPN6P29350 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PTPN6P29350 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
PTPN6P29350 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.09□□□□□ -2.07
PTPN6P29350 RNU6-715P-201ENST00000365204 103 ntBASIC2.09□□□□□ -2.07
PTPN6P29350 MIR186-201ENST00000384988 86 ntBASIC2.09□□□□□ -2.07
PTPN6P29350 BTF3P7-201ENST00000407097 488 ntBASIC2.09□□□□□ -2.07
PTPN6P29350 RNU4-46P-201ENST00000410818 138 ntBASIC2.09□□□□□ -2.07
PTPN6P29350 RNU6-607P-201ENST00000411283 108 ntBASIC2.09□□□□□ -2.07
PTPN6P29350 AC008267.5-201ENST00000424928 265 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms