Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.26□□□□□ -2.05
PTPN4P29074 MIR4648-201ENST00000580107 72 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 MIR4775-201ENST00000581168 75 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.26□□□□□ -2.05
PTPN4P29074 AC046143.2-201ENST00000609789 160 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PTPN4P29074 AC016717.2-201ENST00000609089 5141 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PTPN4P29074 Z75746.1-201ENST00000440243 2080 ntBASIC2.26□□□□□ -2.05
PTPN4P29074 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.25□□□□□ -2.05
PTPN4P29074 OR56A5-201ENST00000340110 738 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 Y_RNA.159-201ENST00000363674 87 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 Y_RNA.194-201ENST00000363985 102 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 SNORA3A-201ENST00000364113 130 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 RNU1-91P-201ENST00000364746 163 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 RNU6-1103P-201ENST00000384150 107 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 Y_RNA.559-201ENST00000384686 107 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.25□□□□□ -2.05
PTPN4P29074 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.25□□□□□ -2.05
PTPN4P29074 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.25□□□□□ -2.05
PTPN4P29074 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.25□□□□□ -2.05
PTPN4P29074 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.25□□□□□ -2.05
PTPN4P29074 IPO7P1-201ENST00000442031 636 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PTPN4P29074 snoU13.15-201ENST00000459407 104 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 RPS3AP17-201ENST00000472594 777 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.25□□□□□ -2.05
PTPN4P29074 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
PTPN4P29074 AC079140.5-201ENST00000507882 310 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 AC026436.1-201ENST00000510537 270 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 AC112206.3-201ENST00000514578 389 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 RNA5SP281-201ENST00000516504 135 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.25□□□□□ -2.05
PTPN4P29074 AC118273.2-201ENST00000532092 465 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.25□□□□□ -2.05
PTPN4P29074 AC092325.1-201ENST00000566449 554 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 DEFB131E-202ENST00000602581 683 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 AC091805.2-201ENST00000603848 235 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 AC025449.1-201ENST00000603896 529 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 NDUFA8P1-201ENST00000605525 367 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 AL121917.1-203ENST00000605534 577 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PTPN4P29074 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.25□□□□□ -2.05
PTPN4P29074 Z99129.1-201ENST00000612510 255 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.25□□□□□ -2.05
PTPN4P29074 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.25□□□□□ -2.05
PTPN4P29074 AC011155.2-201ENST00000623202 216 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 AC012640.5-201ENST00000623897 319 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 AL359740.1-201ENST00000624340 592 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.25□□□□□ -2.05
PTPN4P29074 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.25□□□□□ -2.05
PTPN4P29074 HSPA8P4-201ENST00000511877 1920 ntBASIC2.25□□□□□ -2.05
PTPN4P29074 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.24□□□□□ -2.05
PTPN4P29074 OR4G2P-201ENST00000328113 903 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 RNU4-48P-201ENST00000365559 182 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 Y_RNA.436-201ENST00000384097 102 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 RNU5A-6P-201ENST00000384136 116 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 GSTA9P-201ENST00000406231 611 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 SNORD23.1-201ENST00000408212 104 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 RNU2-66P-201ENST00000410650 161 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 RNU2-16P-201ENST00000410712 136 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 EEF1A1P40-201ENST00000412883 573 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 MTATP6P18-201ENST00000417994 673 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.24□□□□□ -2.05
PTPN4P29074 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.24□□□□□ -2.05
PTPN4P29074 AC010975.2-201ENST00000427781 588 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 AC004383.1-201ENST00000438135 289 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 AC104058.1-201ENST00000448028 297 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.24□□□□□ -2.05
PTPN4P29074 AC022493.1-201ENST00000492984 337 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 HMGB1P29-201ENST00000505659 499 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 MTND2P33-201ENST00000506452 1031 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 AC108078.1-201ENST00000508073 725 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 AC104806.1-201ENST00000508720 308 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 AC109329.1-201ENST00000518744 317 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 CYCSP26-201ENST00000534107 320 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.24□□□□□ -2.05
PTPN4P29074 AC105137.2-201ENST00000569073 466 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 MIR1273D-201ENST00000577266 86 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.24□□□□□ -2.05
PTPN4P29074 MIR5694-201ENST00000581190 76 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.24□□□□□ -2.05
PTPN4P29074 AL391646.1-201ENST00000603860 190 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 AL138963.2-201ENST00000605137 226 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 AC103591.3-201ENST00000608684 209 ntBASIC2.24□□□□□ -2.05
PTPN4P29074 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.24□□□□□ -2.05
PTPN4P29074 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.24□□□□□ -2.05
PTPN4P29074 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
PTPN4P29074 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
PTPN4P29074 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
PTPN4P29074 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
PTPN4P29074 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.23□□□□□ -2.05
PTPN4P29074 SNORD14B-201ENST00000364533 90 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 Y_RNA.296-201ENST00000364930 108 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 MIR504-201ENST00000385065 83 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 AL591416.1-201ENST00000404015 867 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 RNU2-9P-201ENST00000410194 145 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 AC073464.1-201ENST00000429823 534 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 AL162395.1-201ENST00000457882 422 ntBASIC2.23□□□□□ -2.05
PTPN4P29074 RNU7-182P-201ENST00000459009 62 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms