Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
RXRBP28702 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.63□□□□□ -1.67
RXRBP28702 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RXRBP28702 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.63□□□□□ -1.67
RXRBP28702 RPS29P13-201ENST00000402041 169 ntBASIC4.63□□□□□ -1.67
RXRBP28702 HSPE1P8-201ENST00000406997 288 ntBASIC4.63□□□□□ -1.67
RXRBP28702 RN7SKP111-201ENST00000410349 271 ntBASIC4.63□□□□□ -1.67
RXRBP28702 AC063979.1-201ENST00000415539 377 ntBASIC4.63□□□□□ -1.67
RXRBP28702 AC004552.1-201ENST00000419089 348 ntBASIC4.63□□□□□ -1.67
RXRBP28702 AL139281.1-201ENST00000422120 335 ntBASIC4.63□□□□□ -1.67
RXRBP28702 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.63□□□□□ -1.67
RXRBP28702 AL356535.1-201ENST00000440335 398 ntBASIC4.63□□□□□ -1.67
RXRBP28702 HIGD1AP2-201ENST00000446367 280 ntBASIC4.63□□□□□ -1.67
RXRBP28702 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RXRBP28702 RPS26P3-201ENST00000470205 348 ntBASIC4.63□□□□□ -1.67
RXRBP28702 AC090543.2-201ENST00000483963 348 ntBASIC4.63□□□□□ -1.67
RXRBP28702 AC087190.1-201ENST00000484462 480 ntBASIC4.63□□□□□ -1.67
RXRBP28702 AC004057.1-201ENST00000485827 348 ntBASIC4.63□□□□□ -1.67
RXRBP28702 AC107032.1-201ENST00000485945 480 ntBASIC4.63□□□□□ -1.67
RXRBP28702 AC022493.1-201ENST00000492984 337 ntBASIC4.63□□□□□ -1.67
RXRBP28702 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.63□□□□□ -1.67
RXRBP28702 AC074198.2-201ENST00000508153 258 ntBASIC4.63□□□□□ -1.67
RXRBP28702 SNORA31.22-201ENST00000517204 135 ntBASIC4.63□□□□□ -1.67
RXRBP28702 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.63□□□□□ -1.67
RXRBP28702 AP002770.2-201ENST00000543613 532 ntBASIC4.63□□□□□ -1.67
RXRBP28702 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.63□□□□□ -1.67
RXRBP28702 AC098826.3-201ENST00000603823 466 ntBASIC4.63□□□□□ -1.67
RXRBP28702 MIR376A1-201ENST00000616574 68 ntBASIC4.63□□□□□ -1.67
RXRBP28702 RMST_4.1-201ENST00000616886 107 ntBASIC4.63□□□□□ -1.67
RXRBP28702 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RXRBP28702 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
RXRBP28702 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
RXRBP28702 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
RXRBP28702 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RXRBP28702 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RXRBP28702 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
RXRBP28702 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RXRBP28702 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RXRBP28702 MIR411-201ENST00000362239 96 ntBASIC4.62□□□□□ -1.67
RXRBP28702 SNORD74.4-201ENST00000364129 80 ntBASIC4.62□□□□□ -1.67
RXRBP28702 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.62□□□□□ -1.67
RXRBP28702 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RXRBP28702 Y_RNA.676-201ENST00000516393 96 ntBASIC4.62□□□□□ -1.67
RXRBP28702 AC090281.1-201ENST00000523019 276 ntBASIC4.62□□□□□ -1.67
RXRBP28702 AC087441.2-201ENST00000529141 262 ntBASIC4.62□□□□□ -1.67
RXRBP28702 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.62□□□□□ -1.67
RXRBP28702 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.62□□□□□ -1.67
RXRBP28702 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.62□□□□□ -1.67
RXRBP28702 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.62□□□□□ -1.67
RXRBP28702 RNA5SP108-201ENST00000605921 117 ntBASIC4.62□□□□□ -1.67
RXRBP28702 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.62□□□□□ -1.67
RXRBP28702 U6.92-201ENST00000636464 89 ntBASIC4.62□□□□□ -1.67
RXRBP28702 AL773545.4-201ENST00000637262 310 ntBASIC4.62□□□□□ -1.67
RXRBP28702 AL513478.4-201ENST00000641636 310 ntBASIC4.62□□□□□ -1.67
RXRBP28702 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RXRBP28702 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RXRBP28702 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RXRBP28702 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RXRBP28702 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.62□□□□□ -1.67
RXRBP28702 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
RXRBP28702 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RXRBP28702 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.61□□□□□ -1.67
RXRBP28702 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RXRBP28702 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RXRBP28702 MTND5P9-201ENST00000503854 1755 ntBASIC4.61□□□□□ -1.67
RXRBP28702 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.61□□□□□ -1.67
RXRBP28702 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RXRBP28702 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RXRBP28702 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.61□□□□□ -1.67
RXRBP28702 Y_RNA.76-201ENST00000362931 109 ntBASIC4.61□□□□□ -1.67
RXRBP28702 SNORD50.1-201ENST00000362987 71 ntBASIC4.61□□□□□ -1.67
RXRBP28702 Y_RNA.170-201ENST00000363746 110 ntBASIC4.61□□□□□ -1.67
RXRBP28702 RNU6-263P-201ENST00000363811 107 ntBASIC4.61□□□□□ -1.67
RXRBP28702 RNU6-933P-201ENST00000384424 107 ntBASIC4.61□□□□□ -1.67
RXRBP28702 RNU6-700P-201ENST00000391043 107 ntBASIC4.61□□□□□ -1.67
RXRBP28702 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.61□□□□□ -1.67
RXRBP28702 AC133134.1-201ENST00000466800 359 ntBASIC4.61□□□□□ -1.67
RXRBP28702 AC006517.1-201ENST00000480485 328 ntBASIC4.61□□□□□ -1.67
RXRBP28702 RPL30P10-201ENST00000488148 337 ntBASIC4.61□□□□□ -1.67
RXRBP28702 FCF1P8-201ENST00000510322 597 ntBASIC4.61□□□□□ -1.67
RXRBP28702 AC008489.1-201ENST00000524271 483 ntBASIC4.61□□□□□ -1.67
RXRBP28702 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.61□□□□□ -1.67
RXRBP28702 GTF3AP2-201ENST00000557014 266 ntBASIC4.61□□□□□ -1.67
RXRBP28702 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.61□□□□□ -1.67
RXRBP28702 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.61□□□□□ -1.67
RXRBP28702 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.61□□□□□ -1.67
RXRBP28702 AP003355.3-201ENST00000623465 114 ntBASIC4.61□□□□□ -1.67
RXRBP28702 LINC02555-201ENST00000563933 1951 ntBASIC4.61□□□□□ -1.67
RXRBP28702 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RXRBP28702 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.61□□□□□ -1.67
RXRBP28702 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RXRBP28702 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RXRBP28702 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.6□□□□□ -1.67
RXRBP28702 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.6□□□□□ -1.67
RXRBP28702 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.6□□□□□ -1.67
RXRBP28702 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RXRBP28702 RPL9P7-201ENST00000330965 580 ntBASIC4.6□□□□□ -1.67
RXRBP28702 RNU6-356P-201ENST00000384140 107 ntBASIC4.6□□□□□ -1.67
RXRBP28702 Y_RNA.581-201ENST00000391017 97 ntBASIC4.6□□□□□ -1.67
RXRBP28702 EI24P1-201ENST00000416584 867 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms