Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL589872.1-201ENST00000426602 288 ntBASIC-0.05□□□□□ -2.42
HMGA1P17096 AL512637.2-201ENST00000431287 1256 ntBASIC-0.05□□□□□ -2.42
HMGA1P17096 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.05□□□□□ -2.42
HMGA1P17096 MTND5P14-201ENST00000441481 1267 ntBASIC-0.05□□□□□ -2.42
HMGA1P17096 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.05□□□□□ -2.42
HMGA1P17096 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC-0.05□□□□□ -2.42
HMGA1P17096 AC067940.1-201ENST00000458411 300 ntBASIC-0.05□□□□□ -2.42
HMGA1P17096 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.05□□□□□ -2.42
HMGA1P17096 IGJP1-201ENST00000522682 475 ntBASIC-0.05□□□□□ -2.42
HMGA1P17096 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.05□□□□□ -2.42
HMGA1P17096 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC-0.05□□□□□ -2.42
HMGA1P17096 LARP7P1-201ENST00000605576 316 ntBASIC-0.05□□□□□ -2.42
HMGA1P17096 AL583856.2-201ENST00000606298 543 ntBASIC-0.05□□□□□ -2.42
HMGA1P17096 AC135803.1-201ENST00000608748 565 ntBASIC-0.05□□□□□ -2.42
HMGA1P17096 AC024257.5-201ENST00000612739 531 ntBASIC-0.05□□□□□ -2.42
HMGA1P17096 uc_338.15-201ENST00000615470 191 ntBASIC-0.05□□□□□ -2.42
HMGA1P17096 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.05□□□□□ -2.42
HMGA1P17096 RNU6-112P-201ENST00000363599 104 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 RNU6-331P-201ENST00000384724 107 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 RNU6-360P-201ENST00000390944 104 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 RNU6-700P-201ENST00000391043 107 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC-0.06□□□□□ -2.42
HMGA1P17096 AL109755.1-201ENST00000401791 649 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 AL133475.1-201ENST00000404414 305 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 AC093422.3-201ENST00000428506 305 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 AC000111.3-201ENST00000433478 193 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 RPS25P9-201ENST00000435591 252 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.06□□□□□ -2.42
HMGA1P17096 AC002429.1-201ENST00000437672 148 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.06□□□□□ -2.42
HMGA1P17096 HMGN3P1-201ENST00000453847 193 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.06□□□□□ -2.42
HMGA1P17096 RPL30P1-201ENST00000488676 339 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 AC113398.2-201ENST00000507630 558 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 AC022483.1-201ENST00000514020 567 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 AP003066.2-201ENST00000529375 555 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.06□□□□□ -2.42
HMGA1P17096 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC-0.06□□□□□ -2.42
HMGA1P17096 AC012213.3-201ENST00000577199 777 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.06□□□□□ -2.42
HMGA1P17096 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.06□□□□□ -2.42
HMGA1P17096 MIRLET7D-201ENST00000362263 87 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 MIR649-201ENST00000384843 97 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
HMGA1P17096 RNU6ATAC8P-201ENST00000408460 126 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 RNU2-48P-201ENST00000410694 191 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 AL353621.1-201ENST00000418219 243 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 BEND7P1-201ENST00000422058 457 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 PTGES3P4-201ENST00000426243 356 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 TIMM9P1-201ENST00000436122 256 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC-0.07□□□□□ -2.42
HMGA1P17096 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.07□□□□□ -2.42
HMGA1P17096 RNA5SP269-201ENST00000459032 137 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.07□□□□□ -2.42
HMGA1P17096 MTATP6P9-201ENST00000515039 680 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 RNA5SP255-201ENST00000516370 107 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.07□□□□□ -2.42
HMGA1P17096 LSM6P2-201ENST00000552208 177 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 NIFKP8-201ENST00000560500 874 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 MIR3664-201ENST00000579074 99 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 AL031176.1-201ENST00000604554 466 ntBASIC-0.07□□□□□ -2.42
HMGA1P17096 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.07□□□□□ -2.42
HMGA1P17096 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
HMGA1P17096 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
HMGA1P17096 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.08□□□□□ -2.42
HMGA1P17096 AC119751.3-201ENST00000399720 670 ntBASIC-0.08□□□□□ -2.42
HMGA1P17096 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.08□□□□□ -2.42
HMGA1P17096 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC-0.08□□□□□ -2.42
HMGA1P17096 RPL23AP95-201ENST00000426806 265 ntBASIC-0.08□□□□□ -2.42
HMGA1P17096 RPL31P35-201ENST00000431058 377 ntBASIC-0.08□□□□□ -2.42
HMGA1P17096 AC108740.1-201ENST00000498629 225 ntBASIC-0.08□□□□□ -2.42
HMGA1P17096 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC-0.08□□□□□ -2.42
HMGA1P17096 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.08□□□□□ -2.42
HMGA1P17096 AC027104.1-201ENST00000563702 681 ntBASIC-0.08□□□□□ -2.42
HMGA1P17096 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.08□□□□□ -2.42
HMGA1P17096 AC009237.15-201ENST00000610252 501 ntBASIC-0.08□□□□□ -2.42
HMGA1P17096 AC073349.3-201ENST00000617616 186 ntBASIC-0.08□□□□□ -2.42
HMGA1P17096 AC006213.5-201ENST00000619673 288 ntBASIC-0.08□□□□□ -2.42
HMGA1P17096 AC080188.3-201ENST00000624842 748 ntBASIC-0.08□□□□□ -2.42
HMGA1P17096 OR5AK4P-201ENST00000635912 903 ntBASIC-0.08□□□□□ -2.42
HMGA1P17096 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.08□□□□□ -2.42
HMGA1P17096 RNU6-288P-201ENST00000363690 104 ntBASIC-0.09□□□□□ -2.42
HMGA1P17096 RNU6-921P-201ENST00000384361 107 ntBASIC-0.09□□□□□ -2.42
HMGA1P17096 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.09□□□□□ -2.42
HMGA1P17096 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.09□□□□□ -2.42
HMGA1P17096 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.09□□□□□ -2.42
HMGA1P17096 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.09□□□□□ -2.42
HMGA1P17096 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC-0.09□□□□□ -2.42
HMGA1P17096 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.09□□□□□ -2.42
HMGA1P17096 SNORA31.4-201ENST00000516049 129 ntBASIC-0.09□□□□□ -2.42
HMGA1P17096 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC-0.09□□□□□ -2.42
HMGA1P17096 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.09□□□□□ -2.42
HMGA1P17096 AC023050.2-201ENST00000544968 387 ntBASIC-0.09□□□□□ -2.42
HMGA1P17096 AC079598.5-201ENST00000547460 117 ntBASIC-0.09□□□□□ -2.42
HMGA1P17096 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.09□□□□□ -2.42
HMGA1P17096 AC092106.3-201ENST00000611308 722 ntBASIC-0.09□□□□□ -2.42
HMGA1P17096 AL109659.3-201ENST00000624985 950 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms