Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC069200.1-201ENST00000609511 323 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXD8P13378 AL590240.4-201ENST00000616908 390 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 Y_RNA.789-201ENST00000622480 102 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 CR392039.5-201ENST00000623201 510 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXD8P13378 AC008568.2-201ENST00000623862 2313 ntBASIC4.46□□□□□ -1.7
HOXD8P13378 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXD8P13378 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXD8P13378 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXD8P13378 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HOXD8P13378 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD8P13378 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXD8P13378 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD8P13378 RNA5SP399-201ENST00000364003 117 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 U3.15-201ENST00000365398 212 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 RNU6-898P-201ENST00000365627 104 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 RNU6-20P-201ENST00000384106 107 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 U8.11-201ENST00000384699 133 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 U8.12-201ENST00000384701 133 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 MIR449B-201ENST00000384995 97 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 MIR325-201ENST00000385260 98 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 RNA5SP31-201ENST00000411144 127 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 RNU6-1001P-201ENST00000411265 100 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 TOMM22P1-201ENST00000418578 312 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 AC024067.1-201ENST00000426199 223 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXD8P13378 MRPS10P1-201ENST00000448483 130 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXD8P13378 U8.18-201ENST00000459285 133 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 RN7SL271P-201ENST00000487601 295 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXD8P13378 RNU6-567P-201ENST00000516746 107 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXD8P13378 RPL21P9-201ENST00000556149 474 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXD8P13378 AL138963.2-201ENST00000605137 226 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 MIR432-201ENST00000606207 94 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.45□□□□□ -1.7
HOXD8P13378 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD8P13378 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXD8P13378 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXD8P13378 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD8P13378 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD8P13378 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD8P13378 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD8P13378 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD8P13378 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD8P13378 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXD8P13378 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD8P13378 Y_RNA.240-201ENST00000364469 95 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 Y_RNA.398-201ENST00000383952 99 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 SNORA29-201ENST00000384183 140 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 RNU6-918P-201ENST00000391219 106 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 AC083863.1-201ENST00000438811 231 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 RN7SL323P-201ENST00000494712 295 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 AC091874.1-201ENST00000511402 339 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 RNY3P16-201ENST00000516338 101 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 RNU6-1183P-201ENST00000517054 60 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 RNA5SP179-201ENST00000517284 121 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.44□□□□□ -1.7
HOXD8P13378 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXD8P13378 LINC00933-203ENST00000559812 219 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 UBL5P4-201ENST00000562584 236 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 AC087499.8-201ENST00000578406 226 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXD8P13378 AC136601.2-201ENST00000604356 474 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 AC091167.4-201ENST00000605079 184 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 AC073349.3-201ENST00000617616 186 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HOXD8P13378 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD8P13378 AC092435.4-201ENST00000623012 4159 ntBASIC4.44□□□□□ -1.7
HOXD8P13378 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD8P13378 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXD8P13378 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD8P13378 SNORA73.2-201ENST00000364946 201 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 SNORA72.2-201ENST00000365028 127 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 U1.1-201ENST00000384101 164 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 SNORD116-20-201ENST00000384529 92 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 RNU6-140P-201ENST00000384566 108 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 Y_RNA.570-201ENST00000384750 101 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 HLFP1-201ENST00000402375 499 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXD8P13378 RN7SKP156-201ENST00000410308 342 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 RPL23AP36-201ENST00000413895 458 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 AC243964.1-201ENST00000441814 261 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 AL031659.1-201ENST00000447075 539 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 SNORA31.8-201ENST00000516327 108 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 SNORA27.4-201ENST00000516650 95 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 SCARNA14-201ENST00000516903 136 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXD8P13378 MRPS18CP4-201ENST00000535821 231 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD8P13378 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD8P13378 MIR4423-201ENST00000580922 80 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 MIR4282-201ENST00000583613 67 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 AC005176.2-201ENST00000596933 147 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 SNORA51-201ENST00000606420 132 ntBASIC4.43□□□□□ -1.7
HOXD8P13378 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD8P13378 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms