Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 RNU6-968P-201ENST00000384076 107 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.12□□□□□ -2.39
COL6A3P12111 RPS15AP38-201ENST00000413110 372 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.12□□□□□ -2.39
COL6A3P12111 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.12□□□□□ -2.39
COL6A3P12111 AL096803.2-201ENST00000450032 677 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 AC145146.1-201ENST00000496370 254 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 RNA5SP112-201ENST00000515937 99 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 ACA64.5-201ENST00000516207 127 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 AC021231.3-201ENST00000558497 370 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.12□□□□□ -2.39
COL6A3P12111 MIR6516-201ENST00000630554 81 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 SNORD114-16-201ENST00000363044 70 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 RNU4-48P-201ENST00000365559 182 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 SNORA25-201ENST00000384384 134 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 RNU6-348P-201ENST00000384386 107 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
COL6A3P12111 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.12□□□□□ -2.39
COL6A3P12111 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 AC104164.3-201ENST00000467363 1258 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.12□□□□□ -2.39
COL6A3P12111 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.12□□□□□ -2.39
COL6A3P12111 AC091874.1-201ENST00000511402 339 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 HAUS1P3-201ENST00000523909 662 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.12□□□□□ -2.39
COL6A3P12111 AL009028.1-201ENST00000604895 802 ntBASIC0.12□□□□□ -2.39
COL6A3P12111 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
COL6A3P12111 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.11□□□□□ -2.39
COL6A3P12111 Y_RNA.494-201ENST00000384432 111 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 DHFRP6-201ENST00000401776 268 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 RNU2-49P-201ENST00000410666 184 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.11□□□□□ -2.39
COL6A3P12111 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.11□□□□□ -2.39
COL6A3P12111 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.11□□□□□ -2.39
COL6A3P12111 RNU1-131P-201ENST00000458943 161 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 HMGB1P36-201ENST00000487709 576 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 AL163195.1-201ENST00000496941 348 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.11□□□□□ -2.39
COL6A3P12111 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.11□□□□□ -2.39
COL6A3P12111 SCARNA17-201ENST00000516183 144 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 RNA5SP404-201ENST00000517118 132 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.11□□□□□ -2.39
COL6A3P12111 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.11□□□□□ -2.39
COL6A3P12111 AP003973.1-201ENST00000604639 691 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 AC008498.1-201ENST00000613012 531 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 MIR5739-201ENST00000619803 80 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.11□□□□□ -2.39
COL6A3P12111 RNU6-26P-201ENST00000383985 107 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 SNORD65-201ENST00000391079 73 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.11□□□□□ -2.39
COL6A3P12111 AC007742.1-201ENST00000425789 329 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 ELOCP26-201ENST00000436067 329 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 CYP2C59P-201ENST00000457790 269 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 SNORA31.6-201ENST00000516241 130 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 SNORA70.16-201ENST00000516390 95 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.11□□□□□ -2.39
COL6A3P12111 MIR5093-201ENST00000583199 100 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 AC073544.2-201ENST00000601155 540 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 MIR8074-201ENST00000615081 81 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 RMST_5.1-201ENST00000618704 126 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 AP003399.1-201ENST00000637534 361 ntBASIC0.11□□□□□ -2.39
COL6A3P12111 RNU4-23P-201ENST00000362839 140 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 RNU6-1249P-201ENST00000363237 111 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 MT-TC-201ENST00000387405 66 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 MTCYBP3-201ENST00000445588 1137 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 AC147055.4-201ENST00000504399 745 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.1□□□□□ -2.39
COL6A3P12111 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.1□□□□□ -2.39
COL6A3P12111 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.1□□□□□ -2.39
COL6A3P12111 AC125611.1-201ENST00000549563 229 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 MIR3921-201ENST00000577308 85 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.1□□□□□ -2.39
COL6A3P12111 AC068790.6-201ENST00000602558 258 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
COL6A3P12111 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
COL6A3P12111 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
COL6A3P12111 MIR411-201ENST00000362239 96 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 NCOR1P3-201ENST00000420479 303 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
COL6A3P12111 FGF7P5-201ENST00000441829 291 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 RPL21P47-201ENST00000483696 477 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 SCARNA16.5-201ENST00000517114 183 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.1□□□□□ -2.39
COL6A3P12111 AC097372.4-201ENST00000625025 466 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.1□□□□□ -2.39
COL6A3P12111 AC092125.1-201ENST00000562568 1995 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
COL6A3P12111 RNA5SP192-201ENST00000364404 120 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.1□□□□□ -2.39
COL6A3P12111 MIR19B1-201ENST00000384829 87 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 HMGN2P39-201ENST00000398005 273 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 AL160275.3-201ENST00000423876 471 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.1□□□□□ -2.39
COL6A3P12111 AC245047.7-201ENST00000440265 293 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.1□□□□□ -2.39
COL6A3P12111 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.1□□□□□ -2.39
COL6A3P12111 RNU6-902P-201ENST00000517212 91 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 AC007151.1-201ENST00000572774 483 ntBASIC0.1□□□□□ -2.39
COL6A3P12111 AL513534.2-201ENST00000603836 250 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms