Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 Y_RNA.405-201ENST00000383979 100 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 Y_RNA.451-201ENST00000384200 100 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 Y_RNA.524-201ENST00000384564 100 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 Y_RNA.561-201ENST00000384694 100 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 RNA5SP424-201ENST00000390988 115 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 ARF4P2-201ENST00000430209 526 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 USP9YP16-201ENST00000430287 407 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 AL591043.1-201ENST00000432461 424 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 PCNPP5-201ENST00000452246 481 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 USP9YP23-201ENST00000455085 407 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 HMGN2P16-201ENST00000456802 261 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 RPL21P129-201ENST00000491732 478 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 RPL23AP49-201ENST00000492925 468 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 RNA5SP208-201ENST00000516156 78 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 RNU2-53P-201ENST00000516257 147 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 IGHV3-76-201ENST00000522465 295 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.73□□□□□ -1.81
COL6A2P12110 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.73□□□□□ -1.81
COL6A2P12110 AC090517.1-201ENST00000569307 266 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 MIR5047-201ENST00000579212 100 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 ZYXP1-201ENST00000617638 118 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
COL6A2P12110 AC112484.5-201ENST00000624189 228 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 AC241585.2-209ENST00000638217 143 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 RLIMP1-201ENST00000339626 1680 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL6A2P12110 CUL1P1-201ENST00000509510 2425 ntBASIC3.73□□□□□ -1.81
COL6A2P12110 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL6A2P12110 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL6A2P12110 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL6A2P12110 AC233263.6-201ENST00000631132 1963 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL6A2P12110 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
COL6A2P12110 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL6A2P12110 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL6A2P12110 OR56A5-201ENST00000340110 738 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 RNU1-76P-201ENST00000362903 159 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 RNU6-379P-201ENST00000363813 104 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 Y_RNA.222-201ENST00000364264 102 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 U3.13-201ENST00000364804 214 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 Y_RNA.288-201ENST00000364854 92 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL6A2P12110 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.72□□□□□ -1.81
COL6A2P12110 AC006989.1-201ENST00000427212 131 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.72□□□□□ -1.81
COL6A2P12110 MTCO3P29-201ENST00000432119 779 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 HMGN2P20-201ENST00000437531 273 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL6A2P12110 AC243964.1-201ENST00000441814 261 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 RPS27AP10-201ENST00000496103 208 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 RNU6-897P-201ENST00000517135 105 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
COL6A2P12110 AC011602.1-201ENST00000546484 331 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.72□□□□□ -1.81
COL6A2P12110 RPL23AP78-201ENST00000599928 470 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 VN1R85P-201ENST00000601587 426 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 AC006557.5-201ENST00000603126 811 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 AL591034.3-201ENST00000605511 685 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 RMST_8.1-201ENST00000610287 165 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 MIR6867-201ENST00000610636 67 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 AC034229.5-201ENST00000624258 185 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 Z75746.1-201ENST00000440243 2080 ntBASIC3.72□□□□□ -1.81
COL6A2P12110 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.72□□□□□ -1.81
COL6A2P12110 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.72□□□□□ -1.81
COL6A2P12110 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.71□□□□□ -1.81
COL6A2P12110 Y_RNA.183-201ENST00000363882 113 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 RNU6-270P-201ENST00000364131 105 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 RNU4-9P-201ENST00000364951 139 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 Y_RNA.307-201ENST00000365022 117 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 RNU1-100P-201ENST00000365255 165 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 MIR1302-6-201ENST00000408466 90 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 AC002075.2-201ENST00000425207 252 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.71□□□□□ -1.82
COL6A2P12110 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.71□□□□□ -1.82
COL6A2P12110 OR4C10P-201ENST00000434991 931 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 AC125238.1-201ENST00000448842 249 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 SNORA40.15-201ENST00000516884 107 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 Y_RNA.706-201ENST00000516933 99 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 AC023157.2-201ENST00000540596 141 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 HIGD1AP1-201ENST00000550979 275 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 AL442163.3-201ENST00000554110 156 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 MIR92B-201ENST00000607575 96 ntBASIC3.71□□□□□ -1.82
COL6A2P12110 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.71□□□□□ -1.82
COL6A2P12110 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.71□□□□□ -1.82
COL6A2P12110 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL6A2P12110 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.71□□□□□ -1.82
COL6A2P12110 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL6A2P12110 AC009541.1-201ENST00000438279 2662 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 ZNF826P-207ENST00000622273 1910 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
COL6A2P12110 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 RN7SKP280-201ENST00000364196 304 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 RNU6-283P-201ENST00000364788 107 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.7□□□□□ -1.82
COL6A2P12110 Y_RNA.471-201ENST00000384312 102 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 Y_RNA.489-201ENST00000384410 101 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 Y_RNA.518-201ENST00000384552 113 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 MIR184-201ENST00000384962 84 ntBASIC3.7□□□□□ -1.82
COL6A2P12110 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms