Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AP000403.1-201ENST00000603349 851 ntBASIC-0.54□□□□□ -2.5
TOP2AP11388 MIR1295B-201ENST00000636144 60 ntBASIC-0.54□□□□□ -2.5
TOP2AP11388 RNU6-1293P-201ENST00000384077 107 ntBASIC-0.55□□□□□ -2.5
TOP2AP11388 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
TOP2AP11388 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.55□□□□□ -2.5
TOP2AP11388 AC063976.4-201ENST00000421971 163 ntBASIC-0.55□□□□□ -2.5
TOP2AP11388 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC-0.55□□□□□ -2.5
TOP2AP11388 AP1S2P1-201ENST00000457344 379 ntBASIC-0.55□□□□□ -2.5
TOP2AP11388 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC-0.55□□□□□ -2.5
TOP2AP11388 MIR8064-201ENST00000612863 90 ntBASIC-0.55□□□□□ -2.5
TOP2AP11388 RNU6-156P-201ENST00000621869 107 ntBASIC-0.55□□□□□ -2.5
TOP2AP11388 AC091965.5-201ENST00000624785 342 ntBASIC-0.55□□□□□ -2.5
TOP2AP11388 SNORA25.3-201ENST00000363205 127 ntBASIC-0.56□□□□□ -2.5
TOP2AP11388 Y_RNA.493-201ENST00000384422 102 ntBASIC-0.56□□□□□ -2.5
TOP2AP11388 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC-0.56□□□□□ -2.5
TOP2AP11388 AC096531.1-201ENST00000419107 107 ntBASIC-0.56□□□□□ -2.5
TOP2AP11388 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.56□□□□□ -2.5
TOP2AP11388 AL035398.1-201ENST00000430869 322 ntBASIC-0.56□□□□□ -2.5
TOP2AP11388 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.56□□□□□ -2.5
TOP2AP11388 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.56□□□□□ -2.5
TOP2AP11388 RNU6-491P-201ENST00000516099 110 ntBASIC-0.56□□□□□ -2.5
TOP2AP11388 COPS8P3-201ENST00000526024 482 ntBASIC-0.56□□□□□ -2.5
TOP2AP11388 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.56□□□□□ -2.5
TOP2AP11388 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.56□□□□□ -2.5
TOP2AP11388 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.56□□□□□ -2.5
TOP2AP11388 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.56□□□□□ -2.5
TOP2AP11388 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.56□□□□□ -2.5
TOP2AP11388 AC138749.5-201ENST00000611461 208 ntBASIC-0.56□□□□□ -2.5
TOP2AP11388 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC-0.56□□□□□ -2.5
TOP2AP11388 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.57□□□□□ -2.5
TOP2AP11388 SNORA42.1-201ENST00000363515 137 ntBASIC-0.57□□□□□ -2.5
TOP2AP11388 RN7SKP266-201ENST00000410232 287 ntBASIC-0.57□□□□□ -2.5
TOP2AP11388 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.57□□□□□ -2.5
TOP2AP11388 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC-0.57□□□□□ -2.5
TOP2AP11388 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.57□□□□□ -2.5
TOP2AP11388 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.57□□□□□ -2.5
TOP2AP11388 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC-0.57□□□□□ -2.5
TOP2AP11388 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC-0.57□□□□□ -2.5
TOP2AP11388 MIR4765-201ENST00000585007 77 ntBASIC-0.57□□□□□ -2.5
TOP2AP11388 AL592221.1-201ENST00000605266 382 ntBASIC-0.57□□□□□ -2.5
TOP2AP11388 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC-0.57□□□□□ -2.5
TOP2AP11388 AC024257.5-201ENST00000612739 531 ntBASIC-0.57□□□□□ -2.5
TOP2AP11388 RNU6-1331P-201ENST00000363658 106 ntBASIC-0.58□□□□□ -2.5
TOP2AP11388 MIR597-201ENST00000384968 97 ntBASIC-0.58□□□□□ -2.5
TOP2AP11388 MIR938-201ENST00000401216 83 ntBASIC-0.58□□□□□ -2.5
TOP2AP11388 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.58□□□□□ -2.5
TOP2AP11388 NANOGP2-201ENST00000435391 727 ntBASIC-0.58□□□□□ -2.5
TOP2AP11388 DAP3P1-201ENST00000441522 278 ntBASIC-0.58□□□□□ -2.5
TOP2AP11388 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.58□□□□□ -2.5
TOP2AP11388 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC-0.58□□□□□ -2.5
TOP2AP11388 AP000860.1-201ENST00000605250 559 ntBASIC-0.58□□□□□ -2.5
TOP2AP11388 AL022345.1-201ENST00000607292 135 ntBASIC-0.58□□□□□ -2.5
TOP2AP11388 RNU6-46P-201ENST00000383860 107 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 MIR106A-201ENST00000384870 81 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 AL136372.1-201ENST00000403060 228 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 SNX2P2-201ENST00000424553 323 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 MTCO3P18-201ENST00000440206 761 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC-0.59□□□□□ -2.5
TOP2AP11388 MTCO3P7-201ENST00000510008 774 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC-0.59□□□□□ -2.5
TOP2AP11388 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.59□□□□□ -2.5
TOP2AP11388 AL049737.1-201ENST00000413920 1403 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 MTND5P16-201ENST00000460269 1703 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 SNORD49B-201ENST00000365172 72 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC-0.59□□□□□ -2.5
TOP2AP11388 MIR643-201ENST00000385267 97 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 RNA5SP266-201ENST00000410273 108 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
TOP2AP11388 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.59□□□□□ -2.5
TOP2AP11388 AC010409.1-201ENST00000487382 476 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 SUMO2P16-201ENST00000519475 264 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 AC069113.3-201ENST00000521019 150 ntBASIC-0.59□□□□□ -2.5
TOP2AP11388 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.59□□□□□ -2.5
TOP2AP11388 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC-0.59□□□□□ -2.5
TOP2AP11388 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
TOP2AP11388 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
TOP2AP11388 RNU6-674P-201ENST00000363831 107 ntBASIC-0.6□□□□□ -2.51
TOP2AP11388 RNU4-9P-201ENST00000364951 139 ntBASIC-0.6□□□□□ -2.51
TOP2AP11388 CCNG1P1-201ENST00000406783 885 ntBASIC-0.6□□□□□ -2.51
TOP2AP11388 AC138623.1-201ENST00000418060 216 ntBASIC-0.6□□□□□ -2.51
TOP2AP11388 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.6□□□□□ -2.51
TOP2AP11388 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.6□□□□□ -2.51
TOP2AP11388 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC-0.6□□□□□ -2.51
TOP2AP11388 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.6□□□□□ -2.51
TOP2AP11388 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.6□□□□□ -2.51
TOP2AP11388 MTND4P19-201ENST00000446659 478 ntBASIC-0.6□□□□□ -2.51
TOP2AP11388 RPF2P2-201ENST00000504693 896 ntBASIC-0.6□□□□□ -2.51
TOP2AP11388 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.6□□□□□ -2.51
TOP2AP11388 BBIP1P1-201ENST00000602999 279 ntBASIC-0.6□□□□□ -2.51
TOP2AP11388 AC079791.1-201ENST00000605356 973 ntBASIC-0.6□□□□□ -2.51
TOP2AP11388 AL589743.7-201ENST00000612637 233 ntBASIC-0.6□□□□□ -2.51
TOP2AP11388 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
TOP2AP11388 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC-0.61□□□□□ -2.51
TOP2AP11388 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC-0.61□□□□□ -2.51
TOP2AP11388 MRPS17P3-201ENST00000465453 385 ntBASIC-0.61□□□□□ -2.51
TOP2AP11388 LDHBP3-201ENST00000514909 822 ntBASIC-0.61□□□□□ -2.51
TOP2AP11388 RNU6-1282P-201ENST00000516735 96 ntBASIC-0.61□□□□□ -2.51
TOP2AP11388 RNA5SP503-201ENST00000517047 117 ntBASIC-0.61□□□□□ -2.51
TOP2AP11388 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC-0.61□□□□□ -2.51
TOP2AP11388 AC104408.1-201ENST00000605241 170 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms