Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
IGHV3-43DP0DP04 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 RNU6-212P-201ENST00000362642 104 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 SNORA67.3-201ENST00000384366 140 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 MIR95-201ENST00000385072 81 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 RNU2-9P-201ENST00000410194 145 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 RNA5SP508-201ENST00000411327 119 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 CYCSP33-201ENST00000414485 327 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AIMP1P2-201ENST00000425294 312 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AC016691.1-201ENST00000441321 413 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 MTND1P18-201ENST00000448191 573 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AC025033.1-201ENST00000463883 194 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AC090255.1-201ENST00000495779 349 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 RNU7-193P-201ENST00000516723 65 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AL512310.1-201ENST00000548639 172 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AC026464.5-201ENST00000562497 722 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AC009063.1-201ENST00000563342 702 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 MIR3126-201ENST00000577443 74 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 MIR4703-201ENST00000577728 79 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 MIR4528-201ENST00000577763 90 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 SNORD53-201ENST00000579969 78 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AC009314.1-201ENST00000603871 304 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 Y_RNA.783-201ENST00000613546 102 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AL161423.1-201ENST00000613700 262 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 AL031601.2-202ENST00000622650 282 ntBASIC1.7□□□□□ -2.14
IGHV3-43DP0DP04 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 RNU6-655P-201ENST00000362858 107 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 RNU6-529P-201ENST00000363383 104 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 SNORA64-201ENST00000384674 134 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 RNY3P9-201ENST00000384727 106 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 MIR561-201ENST00000385216 97 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AL591034.2-201ENST00000402839 359 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 SNORD23.1-201ENST00000408212 104 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 RNA5SP390-201ENST00000410191 113 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 RNU2-23P-201ENST00000410545 195 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AL139156.1-201ENST00000412785 841 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 USP9YP27-201ENST00000418455 438 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 Z98742.3-201ENST00000418637 326 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AL669831.1-202ENST00000428504 417 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 MTCO2P11-201ENST00000431069 680 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 GTF2IP13-201ENST00000438487 386 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 RNU6-586P-201ENST00000517265 104 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 MTCO2P4-201ENST00000517968 247 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AL670379.2-201ENST00000604983 252 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AC008536.2-201ENST00000607284 349 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 uc_338.11-201ENST00000619132 160 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AC012640.5-201ENST00000623897 319 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AC097520.1-201ENST00000624435 385 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 AC090517.3-201ENST00000625170 141 ntBASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.69□□□□□ -2.14
IGHV3-43DP0DP04 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 RNU1-23P-201ENST00000363361 144 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 RNU6-1303P-201ENST00000364841 107 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 SNORA25B-201ENST00000365507 128 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 RNU6-606P-201ENST00000384721 111 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 RNA5SP338-201ENST00000410495 85 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 AC132479.1-201ENST00000449160 144 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 AL353705.4-201ENST00000449661 238 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 RPL30P12-201ENST00000474666 353 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 AL121594.1-201ENST00000475906 575 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 RPL9P6-201ENST00000492764 598 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 AC092436.1-201ENST00000506450 503 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 MTCYBP40-201ENST00000509390 1135 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 SNORA4.4-201ENST00000515921 135 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 AP000873.5-201ENST00000533906 236 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 IMMP1LP2-201ENST00000552954 492 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 RPS3AP23-202ENST00000574601 686 ntBASIC1.68□□□□□ -2.14
IGHV3-43DP0DP04 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms