Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SMIM17P0DL12 AC006270.3-201ENST00000605967 1036 ntBASIC0.82□□□□□ -2.28
SMIM17P0DL12 AC013412.1-201ENST00000610687 192 ntBASIC0.82□□□□□ -2.28
SMIM17P0DL12 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.82□□□□□ -2.28
SMIM17P0DL12 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SMIM17P0DL12 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
SMIM17P0DL12 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
SMIM17P0DL12 RNU1-22P-201ENST00000363334 158 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 RNU6-1187P-201ENST00000364771 110 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 Y_RNA.332-201ENST00000365271 113 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 RNU6-278P-201ENST00000390945 109 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 Y_RNA.597-201ENST00000410463 100 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 MTND4P3-201ENST00000417829 541 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.81□□□□□ -2.28
SMIM17P0DL12 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.81□□□□□ -2.28
SMIM17P0DL12 FTH1P12-201ENST00000432137 551 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 AL591212.2-201ENST00000433923 257 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.81□□□□□ -2.28
SMIM17P0DL12 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SMIM17P0DL12 AL583843.1-201ENST00000456070 346 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.81□□□□□ -2.28
SMIM17P0DL12 snoU13.15-201ENST00000459407 104 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.81□□□□□ -2.28
SMIM17P0DL12 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.81□□□□□ -2.28
SMIM17P0DL12 AC113347.3-201ENST00000509113 148 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 AC008837.2-201ENST00000513076 418 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 SNORD116-28-201ENST00000516123 91 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.81□□□□□ -2.28
SMIM17P0DL12 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.81□□□□□ -2.28
SMIM17P0DL12 AP003465.2-201ENST00000602571 373 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 AC022893.3-201ENST00000607665 437 ntBASIC0.81□□□□□ -2.28
SMIM17P0DL12 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
SMIM17P0DL12 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.81□□□□□ -2.28
SMIM17P0DL12 LINC02555-201ENST00000563933 1951 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 snoU2_19.1-201ENST00000362361 80 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 RNU1-124P-201ENST00000363861 145 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.8□□□□□ -2.28
SMIM17P0DL12 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SMIM17P0DL12 MIR513A1-201ENST00000385138 129 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 Y_RNA.578-201ENST00000390903 88 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 AC009518.2-201ENST00000418056 731 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 RPL23AP76-201ENST00000441860 458 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 NDUFB1P2-201ENST00000449477 176 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 snoU13.26-201ENST00000459452 105 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 RPL9P9-202ENST00000466501 579 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.8□□□□□ -2.28
SMIM17P0DL12 AC009646.1-201ENST00000510455 318 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 MTCO3P27-201ENST00000514397 196 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 CENPUP1-201ENST00000526649 1202 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.8□□□□□ -2.28
SMIM17P0DL12 AL158827.2-201ENST00000602494 330 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 AL022154.1-201ENST00000604698 785 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 AC092574.1-201ENST00000609771 420 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 AL355472.4-201ENST00000610233 626 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 AL354696.1-201ENST00000614652 497 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 AL157834.3-201ENST00000615543 103 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 AL158163.2-201ENST00000619110 700 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 AL691447.3-201ENST00000635020 330 ntBASIC0.8□□□□□ -2.28
SMIM17P0DL12 RNU6-212P-201ENST00000362642 104 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 SNORA7.1-201ENST00000363750 139 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 RNA5SP126-201ENST00000365092 109 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 MIR1289-2-201ENST00000408360 111 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 Y_RNA.623-201ENST00000411128 95 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.79□□□□□ -2.28
SMIM17P0DL12 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.79□□□□□ -2.28
SMIM17P0DL12 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.79□□□□□ -2.28
SMIM17P0DL12 MTND1P30-201ENST00000441241 901 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 CALM1P1-201ENST00000442082 433 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 KATNBL1P3-201ENST00000443475 909 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.79□□□□□ -2.28
SMIM17P0DL12 RPL39P28-201ENST00000465655 155 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 AC091163.3-201ENST00000518269 1144 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SMIM17P0DL12 CYP3A52P-201ENST00000563326 91 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 MIR5094-201ENST00000578766 85 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 MIR4303-201ENST00000581299 66 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.79□□□□□ -2.28
SMIM17P0DL12 NIFKP6-201ENST00000598115 845 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 BNIP3P26-201ENST00000600827 554 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 MTATP6P2-201ENST00000603319 678 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 AP000654.2-201ENST00000605633 586 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 AC095038.3-201ENST00000634439 195 ntBASIC0.79□□□□□ -2.28
SMIM17P0DL12 AC100821.1-201ENST00000523153 2479 ntBASIC0.78□□□□□ -2.28
SMIM17P0DL12 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SMIM17P0DL12 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SMIM17P0DL12 Y_RNA.311-201ENST00000365068 96 ntBASIC0.78□□□□□ -2.28
SMIM17P0DL12 SMIM11P1-201ENST00000369586 178 ntBASIC0.78□□□□□ -2.28
SMIM17P0DL12 SNORA29-201ENST00000384183 140 ntBASIC0.78□□□□□ -2.28
SMIM17P0DL12 AL357139.1-201ENST00000407792 426 ntBASIC0.78□□□□□ -2.28
SMIM17P0DL12 MIR320C1-201ENST00000408566 88 ntBASIC0.78□□□□□ -2.28
SMIM17P0DL12 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.78□□□□□ -2.28
SMIM17P0DL12 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SMIM17P0DL12 AL627311.1-201ENST00000431514 115 ntBASIC0.78□□□□□ -2.28
SMIM17P0DL12 HSPE1P9-201ENST00000440046 311 ntBASIC0.78□□□□□ -2.28
SMIM17P0DL12 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SMIM17P0DL12 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.78□□□□□ -2.28
SMIM17P0DL12 SUMO2P5-201ENST00000506790 245 ntBASIC0.78□□□□□ -2.28
SMIM17P0DL12 RNU6-677P-201ENST00000516914 101 ntBASIC0.78□□□□□ -2.28
SMIM17P0DL12 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms