Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNU6-166P-201ENST00000384371 107 ntBASIC3.34□□□□□ -1.87
RHOP08100 Y_RNA.500-201ENST00000384466 111 ntBASIC3.34□□□□□ -1.87
RHOP08100 RNU6-331P-201ENST00000384724 107 ntBASIC3.34□□□□□ -1.87
RHOP08100 RNU6-1105P-201ENST00000384774 107 ntBASIC3.34□□□□□ -1.87
RHOP08100 RNU6-1197P-201ENST00000391183 107 ntBASIC3.34□□□□□ -1.87
RHOP08100 RNA5SP229-201ENST00000410809 99 ntBASIC3.34□□□□□ -1.87
RHOP08100 RNU6-325P-201ENST00000411132 105 ntBASIC3.34□□□□□ -1.87
RHOP08100 SNORD56-201ENST00000413522 71 ntBASIC3.34□□□□□ -1.87
RHOP08100 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.34□□□□□ -1.87
RHOP08100 AL117339.3-201ENST00000418733 162 ntBASIC3.34□□□□□ -1.87
RHOP08100 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.34□□□□□ -1.87
RHOP08100 AC098614.2-201ENST00000426040 255 ntBASIC3.34□□□□□ -1.87
RHOP08100 RPL23AP82-202ENST00000427528 469 ntBASIC3.34□□□□□ -1.87
RHOP08100 SNRPEP9-201ENST00000436794 238 ntBASIC3.34□□□□□ -1.87
RHOP08100 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.34□□□□□ -1.87
RHOP08100 CENPBD1P1-201ENST00000464061 469 ntBASIC3.34□□□□□ -1.87
RHOP08100 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.34□□□□□ -1.87
RHOP08100 AC022493.2-201ENST00000506122 481 ntBASIC3.34□□□□□ -1.87
RHOP08100 AC116655.1-201ENST00000508324 901 ntBASIC3.34□□□□□ -1.87
RHOP08100 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.34□□□□□ -1.87
RHOP08100 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.34□□□□□ -1.87
RHOP08100 RNU6-699P-201ENST00000517081 110 ntBASIC3.34□□□□□ -1.87
RHOP08100 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RHOP08100 MIR3186-201ENST00000577404 85 ntBASIC3.34□□□□□ -1.87
RHOP08100 MIR4474-201ENST00000579189 78 ntBASIC3.34□□□□□ -1.87
RHOP08100 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.34□□□□□ -1.87
RHOP08100 AL078596.1-201ENST00000624856 447 ntBASIC3.34□□□□□ -1.87
RHOP08100 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RHOP08100 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RHOP08100 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
RHOP08100 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.34□□□□□ -1.88
RHOP08100 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
RHOP08100 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
RHOP08100 AC090740.1-201ENST00000623193 2262 ntBASIC3.33□□□□□ -1.88
RHOP08100 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHOP08100 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
RHOP08100 Y_RNA.364-201ENST00000365532 101 ntBASIC3.33□□□□□ -1.88
RHOP08100 MIR10A-201ENST00000385043 110 ntBASIC3.33□□□□□ -1.88
RHOP08100 MIR493-201ENST00000385254 89 ntBASIC3.33□□□□□ -1.88
RHOP08100 U3.42-201ENST00000408746 214 ntBASIC3.33□□□□□ -1.88
RHOP08100 MIR1289-1-201ENST00000408836 144 ntBASIC3.33□□□□□ -1.88
RHOP08100 RNU6-985P-201ENST00000410182 104 ntBASIC3.33□□□□□ -1.88
RHOP08100 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.33□□□□□ -1.88
RHOP08100 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.33□□□□□ -1.88
RHOP08100 AL078601.1-201ENST00000444542 271 ntBASIC3.33□□□□□ -1.88
RHOP08100 RPL23AP14-201ENST00000468281 468 ntBASIC3.33□□□□□ -1.88
RHOP08100 UBE2DNL-203ENST00000474922 222 ntBASIC3.33□□□□□ -1.88
RHOP08100 AC139453.3-201ENST00000493276 369 ntBASIC3.33□□□□□ -1.88
RHOP08100 AC021146.2-201ENST00000504736 556 ntBASIC3.33□□□□□ -1.88
RHOP08100 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.33□□□□□ -1.88
RHOP08100 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.33□□□□□ -1.88
RHOP08100 SUB1P3-201ENST00000564581 315 ntBASIC3.33□□□□□ -1.88
RHOP08100 BNIP3P16-201ENST00000589779 534 ntBASIC3.33□□□□□ -1.88
RHOP08100 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.33□□□□□ -1.88
RHOP08100 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.33□□□□□ -1.88
RHOP08100 AL033523.1-201ENST00000605153 153 ntBASIC3.33□□□□□ -1.88
RHOP08100 AC004805.2-201ENST00000605382 482 ntBASIC3.33□□□□□ -1.88
RHOP08100 AL121917.1-203ENST00000605534 577 ntBASIC3.33□□□□□ -1.88
RHOP08100 AC007485.1-201ENST00000616755 206 ntBASIC3.33□□□□□ -1.88
RHOP08100 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.33□□□□□ -1.88
RHOP08100 AC099506.2-201ENST00000623074 221 ntBASIC3.33□□□□□ -1.88
RHOP08100 AL137790.1-201ENST00000634283 177 ntBASIC3.33□□□□□ -1.88
RHOP08100 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHOP08100 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
RHOP08100 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RHOP08100 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RHOP08100 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RHOP08100 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RHOP08100 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RHOP08100 RNU6-37P-201ENST00000362692 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-11P-201ENST00000364234 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-7-201ENST00000364784 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-8-201ENST00000365467 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-25P-201ENST00000383873 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-1-201ENST00000383898 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 Y_RNA.428-201ENST00000384078 102 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-48P-201ENST00000384161 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-36P-201ENST00000384172 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-4P-201ENST00000384205 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-5P-201ENST00000384238 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-3P-201ENST00000384314 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-16P-201ENST00000384385 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-15P-201ENST00000384534 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-2-201ENST00000384627 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-29P-201ENST00000384637 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-9-201ENST00000384776 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-33P-201ENST00000384793 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 MIR34A-201ENST00000385130 110 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-1106P-201ENST00000390845 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 MIR548F4-201ENST00000408515 105 ntBASIC3.32□□□□□ -1.88
RHOP08100 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.32□□□□□ -1.88
RHOP08100 RPS15AP10-201ENST00000432472 382 ntBASIC3.32□□□□□ -1.88
RHOP08100 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.32□□□□□ -1.88
RHOP08100 AC025750.2-201ENST00000442609 450 ntBASIC3.32□□□□□ -1.88
RHOP08100 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.32□□□□□ -1.88
RHOP08100 GSTA11P-201ENST00000452866 669 ntBASIC3.32□□□□□ -1.88
RHOP08100 AC013470.1-201ENST00000453438 462 ntBASIC3.32□□□□□ -1.88
RHOP08100 AC092798.1-201ENST00000458542 409 ntBASIC3.32□□□□□ -1.88
RHOP08100 RNU6-1037P-201ENST00000459571 107 ntBASIC3.32□□□□□ -1.88
RHOP08100 AC008571.1-201ENST00000467232 300 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms