Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 RNU6-33P-201ENST00000384793 107 ntBASIC4.62□□□□□ -1.67
NEFMP07197 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NEFMP07197 AC007098.1-201ENST00000420122 367 ntBASIC4.62□□□□□ -1.67
NEFMP07197 AC006946.1-201ENST00000429106 328 ntBASIC4.62□□□□□ -1.67
NEFMP07197 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.62□□□□□ -1.67
NEFMP07197 RBMY2UP-201ENST00000453474 324 ntBASIC4.62□□□□□ -1.67
NEFMP07197 RNU7-169P-201ENST00000459456 61 ntBASIC4.62□□□□□ -1.67
NEFMP07197 RPL7P49-201ENST00000471402 708 ntBASIC4.62□□□□□ -1.67
NEFMP07197 AC025518.1-201ENST00000479856 347 ntBASIC4.62□□□□□ -1.67
NEFMP07197 HMGB3P17-201ENST00000504195 649 ntBASIC4.62□□□□□ -1.67
NEFMP07197 AC025465.3-201ENST00000510570 311 ntBASIC4.62□□□□□ -1.67
NEFMP07197 RNU6-927P-201ENST00000516199 100 ntBASIC4.62□□□□□ -1.67
NEFMP07197 RNU6-897P-201ENST00000517135 105 ntBASIC4.62□□□□□ -1.67
NEFMP07197 SNRPGP15-201ENST00000600149 222 ntBASIC4.62□□□□□ -1.67
NEFMP07197 AC024220.1-201ENST00000603675 484 ntBASIC4.62□□□□□ -1.67
NEFMP07197 SNORA50A-202ENST00000629536 136 ntBASIC4.62□□□□□ -1.67
NEFMP07197 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.61□□□□□ -1.67
NEFMP07197 ZNF299P-201ENST00000406845 1804 ntBASIC4.61□□□□□ -1.67
NEFMP07197 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.61□□□□□ -1.67
NEFMP07197 Y_RNA.26-201ENST00000362539 101 ntBASIC4.61□□□□□ -1.67
NEFMP07197 RNU6-806P-201ENST00000365147 105 ntBASIC4.61□□□□□ -1.67
NEFMP07197 U8.8-201ENST00000365399 135 ntBASIC4.61□□□□□ -1.67
NEFMP07197 MIR548H3-201ENST00000408771 118 ntBASIC4.61□□□□□ -1.67
NEFMP07197 TOMM22P1-201ENST00000418578 312 ntBASIC4.61□□□□□ -1.67
NEFMP07197 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.61□□□□□ -1.67
NEFMP07197 HMGN2P16-201ENST00000456802 261 ntBASIC4.61□□□□□ -1.67
NEFMP07197 RNU6-1037P-201ENST00000459571 107 ntBASIC4.61□□□□□ -1.67
NEFMP07197 RPL21P10-201ENST00000463521 490 ntBASIC4.61□□□□□ -1.67
NEFMP07197 AC133134.1-201ENST00000466800 359 ntBASIC4.61□□□□□ -1.67
NEFMP07197 TRBVB-201ENST00000477100 408 ntBASIC4.61□□□□□ -1.67
NEFMP07197 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.61□□□□□ -1.67
NEFMP07197 APOOP4-201ENST00000513530 597 ntBASIC4.61□□□□□ -1.67
NEFMP07197 RNU6-397P-201ENST00000516226 104 ntBASIC4.61□□□□□ -1.67
NEFMP07197 Y_RNA.700-201ENST00000516806 100 ntBASIC4.61□□□□□ -1.67
NEFMP07197 RNU6-182P-201ENST00000516970 105 ntBASIC4.61□□□□□ -1.67
NEFMP07197 AC034114.1-201ENST00000520293 285 ntBASIC4.61□□□□□ -1.67
NEFMP07197 AP003733.2-201ENST00000529409 171 ntBASIC4.61□□□□□ -1.67
NEFMP07197 RRN3P3-201ENST00000549207 578 ntBASIC4.61□□□□□ -1.67
NEFMP07197 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.61□□□□□ -1.67
NEFMP07197 AC005951.2-201ENST00000576282 495 ntBASIC4.61□□□□□ -1.67
NEFMP07197 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.61□□□□□ -1.67
NEFMP07197 AC107294.1-201ENST00000609524 467 ntBASIC4.61□□□□□ -1.67
NEFMP07197 MIR1244-1-201ENST00000612829 85 ntBASIC4.61□□□□□ -1.67
NEFMP07197 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.61□□□□□ -1.67
NEFMP07197 AL512643.1-201ENST00000635735 524 ntBASIC4.61□□□□□ -1.67
NEFMP07197 MIR1244-3-201ENST00000635744 85 ntBASIC4.61□□□□□ -1.67
NEFMP07197 MIR1244-2-201ENST00000636449 85 ntBASIC4.61□□□□□ -1.67
NEFMP07197 MIR1244-4-202ENST00000636813 85 ntBASIC4.61□□□□□ -1.67
NEFMP07197 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.61□□□□□ -1.67
NEFMP07197 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NEFMP07197 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NEFMP07197 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.61□□□□□ -1.67
NEFMP07197 AL672296.1-201ENST00000427780 2158 ntBASIC4.61□□□□□ -1.67
NEFMP07197 ZNF826P-207ENST00000622273 1910 ntBASIC4.6□□□□□ -1.67
NEFMP07197 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
NEFMP07197 RNU4-35P-201ENST00000362588 141 ntBASIC4.6□□□□□ -1.67
NEFMP07197 RNU6-212P-201ENST00000362642 104 ntBASIC4.6□□□□□ -1.67
NEFMP07197 RNU6-611P-201ENST00000384276 104 ntBASIC4.6□□□□□ -1.67
NEFMP07197 MIR183-201ENST00000384958 110 ntBASIC4.6□□□□□ -1.67
NEFMP07197 MIR301A-201ENST00000385261 86 ntBASIC4.6□□□□□ -1.67
NEFMP07197 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NEFMP07197 MIR548M-201ENST00000408260 86 ntBASIC4.6□□□□□ -1.67
NEFMP07197 AL590135.1-201ENST00000422215 156 ntBASIC4.6□□□□□ -1.67
NEFMP07197 AC087588.1-201ENST00000462203 316 ntBASIC4.6□□□□□ -1.67
NEFMP07197 AC084357.1-201ENST00000473404 255 ntBASIC4.6□□□□□ -1.67
NEFMP07197 HMGB1P35-201ENST00000503360 598 ntBASIC4.6□□□□□ -1.67
NEFMP07197 FCF1P8-201ENST00000510322 597 ntBASIC4.6□□□□□ -1.67
NEFMP07197 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.6□□□□□ -1.67
NEFMP07197 RNU6-138P-201ENST00000515952 107 ntBASIC4.6□□□□□ -1.67
NEFMP07197 Y_RNA.673-201ENST00000516306 88 ntBASIC4.6□□□□□ -1.67
NEFMP07197 MIR892C-201ENST00000516410 77 ntBASIC4.6□□□□□ -1.67
NEFMP07197 RNU6-143P-201ENST00000516942 93 ntBASIC4.6□□□□□ -1.67
NEFMP07197 RNU6-1315P-201ENST00000517187 99 ntBASIC4.6□□□□□ -1.67
NEFMP07197 AC109329.1-201ENST00000518744 317 ntBASIC4.6□□□□□ -1.67
NEFMP07197 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.6□□□□□ -1.67
NEFMP07197 AC011602.1-201ENST00000546484 331 ntBASIC4.6□□□□□ -1.67
NEFMP07197 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.6□□□□□ -1.67
NEFMP07197 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.6□□□□□ -1.67
NEFMP07197 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NEFMP07197 AP000787.2-201ENST00000604432 568 ntBASIC4.6□□□□□ -1.67
NEFMP07197 AL121917.1-203ENST00000605534 577 ntBASIC4.6□□□□□ -1.67
NEFMP07197 MIR3976-201ENST00000606807 139 ntBASIC4.6□□□□□ -1.67
NEFMP07197 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.6□□□□□ -1.67
NEFMP07197 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
NEFMP07197 MIR7153-201ENST00000637758 57 ntBASIC4.6□□□□□ -1.67
NEFMP07197 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEFMP07197 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NEFMP07197 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NEFMP07197 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NEFMP07197 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NEFMP07197 RNU6-335P-201ENST00000364563 113 ntBASIC4.59□□□□□ -1.67
NEFMP07197 SNORA36C-201ENST00000384289 132 ntBASIC4.59□□□□□ -1.67
NEFMP07197 Y_RNA.785-201ENST00000384290 109 ntBASIC4.59□□□□□ -1.67
NEFMP07197 Y_RNA.471-201ENST00000384312 102 ntBASIC4.59□□□□□ -1.67
NEFMP07197 SNORA69.1-201ENST00000390904 137 ntBASIC4.59□□□□□ -1.67
NEFMP07197 RNU6-700P-201ENST00000391043 107 ntBASIC4.59□□□□□ -1.67
NEFMP07197 AL513331.1-201ENST00000411908 397 ntBASIC4.59□□□□□ -1.67
NEFMP07197 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.59□□□□□ -1.67
NEFMP07197 EIF4EP2-201ENST00000422816 654 ntBASIC4.59□□□□□ -1.67
NEFMP07197 AC092423.1-201ENST00000430165 186 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 267.6 ms