Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC018638.7-201ENST00000605836 1114 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC090970.3-201ENST00000612566 866 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AC106754.1-201ENST00000562632 1513 ntBASIC1.13□□□□□ -2.23
COL4A1P02462 AL445523.1-201ENST00000451184 1362 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
COL4A1P02462 RNY4P24-201ENST00000362735 96 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 RNA5SP257-201ENST00000363023 116 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 Y_RNA.302-201ENST00000364997 102 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
COL4A1P02462 RNU11-5P-201ENST00000391216 129 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 AL356432.1-201ENST00000405809 419 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 FCF1P10-201ENST00000407590 479 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 RNU2-33P-201ENST00000410344 192 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 BTF3L4P3-201ENST00000418879 476 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 AL593851.1-201ENST00000426171 157 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.12□□□□□ -2.23
COL4A1P02462 AL596276.1-201ENST00000434465 418 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 LARP1BP3-201ENST00000437229 869 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 AC004383.1-201ENST00000438135 289 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.12□□□□□ -2.23
COL4A1P02462 RPL26P9-201ENST00000457466 433 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 RPL39P36-201ENST00000490784 156 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.12□□□□□ -2.23
COL4A1P02462 AC020699.1-201ENST00000505161 445 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.12□□□□□ -2.23
COL4A1P02462 AC108078.1-201ENST00000508073 725 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 RNU6-311P-201ENST00000516224 102 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 MRPS36P3-201ENST00000519284 130 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.12□□□□□ -2.23
COL4A1P02462 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.12□□□□□ -2.23
COL4A1P02462 AC123904.2-201ENST00000548059 300 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.12□□□□□ -2.23
COL4A1P02462 AC091489.2-201ENST00000566263 604 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.12□□□□□ -2.23
COL4A1P02462 AL391262.2-201ENST00000622466 494 ntBASIC1.12□□□□□ -2.23
COL4A1P02462 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.12□□□□□ -2.23
COL4A1P02462 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
COL4A1P02462 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.12□□□□□ -2.23
COL4A1P02462 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
COL4A1P02462 SNORD14B-201ENST00000364533 90 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 SMIM11P1-201ENST00000369586 178 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 Y_RNA.433-201ENST00000384089 102 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 RNU1-78P-201ENST00000391248 165 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.11□□□□□ -2.23
COL4A1P02462 AC114491.1-201ENST00000416095 246 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.11□□□□□ -2.23
COL4A1P02462 SKA2P1-201ENST00000425592 390 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.11□□□□□ -2.23
COL4A1P02462 HMGB1P9-201ENST00000429856 646 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 MTND1P28-201ENST00000435623 950 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 AC098831.1-201ENST00000440661 216 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.11□□□□□ -2.23
COL4A1P02462 OR6C5P-201ENST00000452388 923 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.11□□□□□ -2.23
COL4A1P02462 SNORD11.1-201ENST00000459482 85 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.11□□□□□ -2.23
COL4A1P02462 AC139453.3-201ENST00000493276 369 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 AC026801.1-201ENST00000497178 464 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.11□□□□□ -2.23
COL4A1P02462 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.11□□□□□ -2.23
COL4A1P02462 AC116347.2-201ENST00000514912 523 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 RNU6-927P-201ENST00000516199 100 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 RNA5SP165-201ENST00000517142 115 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.11□□□□□ -2.23
COL4A1P02462 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.11□□□□□ -2.23
COL4A1P02462 MIR4307-201ENST00000582802 84 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.11□□□□□ -2.23
COL4A1P02462 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.11□□□□□ -2.23
COL4A1P02462 BNIP3P40-201ENST00000596017 556 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 AL355297.2-201ENST00000604792 129 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 AC121334.2-201ENST00000605387 271 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 AC024933.1-201ENST00000608472 348 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 DUSP12P1-201ENST00000612874 516 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 uc_338.14-201ENST00000613162 166 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.11□□□□□ -2.23
COL4A1P02462 AC073308.1-201ENST00000623696 305 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 AC110491.1-201ENST00000562191 2010 ntBASIC1.11□□□□□ -2.23
COL4A1P02462 AC018630.2-201ENST00000534866 2403 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 Y_RNA.115-201ENST00000363272 98 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 RNU4-42P-201ENST00000364738 142 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 MIR513B-201ENST00000385136 84 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
COL4A1P02462 SNORD115.1-201ENST00000391109 76 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.1□□□□□ -2.23
COL4A1P02462 AL109913.1-201ENST00000421173 514 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC006366.1-201ENST00000422002 759 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A1P02462 AC137499.1-201ENST00000427602 88 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.1□□□□□ -2.23
COL4A1P02462 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A1P02462 BRK1P2-201ENST00000442875 223 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC013267.1-201ENST00000458227 267 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A1P02462 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 RNU6-572P-201ENST00000516724 80 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 RNU2-19P-201ENST00000517288 84 ntBASIC1.1□□□□□ -2.23
COL4A1P02462 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.1□□□□□ -2.23
COL4A1P02462 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms