Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.93□□□□□ -1.94
DDX58O95786 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.93□□□□□ -1.94
DDX58O95786 SCARNA18-201ENST00000459004 134 ntBASIC2.93□□□□□ -1.94
DDX58O95786 CKS1BP2-201ENST00000497342 240 ntBASIC2.93□□□□□ -1.94
DDX58O95786 RNU6-506P-201ENST00000516553 94 ntBASIC2.93□□□□□ -1.94
DDX58O95786 Y_RNA.687-201ENST00000516558 91 ntBASIC2.93□□□□□ -1.94
DDX58O95786 RNU5B-3P-201ENST00000516601 115 ntBASIC2.93□□□□□ -1.94
DDX58O95786 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.93□□□□□ -1.94
DDX58O95786 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.93□□□□□ -1.94
DDX58O95786 AP005435.4-201ENST00000529514 284 ntBASIC2.93□□□□□ -1.94
DDX58O95786 AC010186.2-204ENST00000537668 439 ntBASIC2.93□□□□□ -1.94
DDX58O95786 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.93□□□□□ -1.94
DDX58O95786 HIF1AP1-201ENST00000553642 175 ntBASIC2.93□□□□□ -1.94
DDX58O95786 AL512360.1-201ENST00000555346 234 ntBASIC2.93□□□□□ -1.94
DDX58O95786 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.93□□□□□ -1.94
DDX58O95786 AL359880.1-201ENST00000621879 266 ntBASIC2.93□□□□□ -1.94
DDX58O95786 AC068137.4-201ENST00000638485 296 ntBASIC2.93□□□□□ -1.94
DDX58O95786 AC135776.4-201ENST00000624300 1904 ntBASIC2.93□□□□□ -1.94
DDX58O95786 AC131280.1-202ENST00000624067 4211 ntBASIC2.92□□□□□ -1.94
DDX58O95786 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
DDX58O95786 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
DDX58O95786 U8.2-201ENST00000363156 134 ntBASIC2.92□□□□□ -1.94
DDX58O95786 CALM2P3-201ENST00000400429 449 ntBASIC2.92□□□□□ -1.94
DDX58O95786 CIR1P3-201ENST00000405137 479 ntBASIC2.92□□□□□ -1.94
DDX58O95786 AL606923.1-201ENST00000406616 190 ntBASIC2.92□□□□□ -1.94
DDX58O95786 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.92□□□□□ -1.94
DDX58O95786 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.92□□□□□ -1.94
DDX58O95786 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.92□□□□□ -1.94
DDX58O95786 RPL30P4-201ENST00000429309 333 ntBASIC2.92□□□□□ -1.94
DDX58O95786 RPS15AP28-201ENST00000435088 386 ntBASIC2.92□□□□□ -1.94
DDX58O95786 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.92□□□□□ -1.94
DDX58O95786 AC073415.1-201ENST00000449240 153 ntBASIC2.92□□□□□ -1.94
DDX58O95786 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.92□□□□□ -1.94
DDX58O95786 RNU7-26P-201ENST00000458980 63 ntBASIC2.92□□□□□ -1.94
DDX58O95786 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.92□□□□□ -1.94
DDX58O95786 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.92□□□□□ -1.94
DDX58O95786 AIG1P1-201ENST00000503376 148 ntBASIC2.92□□□□□ -1.94
DDX58O95786 TBCAP3-201ENST00000512475 312 ntBASIC2.92□□□□□ -1.94
DDX58O95786 RNU1-86P-201ENST00000516108 154 ntBASIC2.92□□□□□ -1.94
DDX58O95786 RNU1-107P-201ENST00000516617 154 ntBASIC2.92□□□□□ -1.94
DDX58O95786 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.92□□□□□ -1.94
DDX58O95786 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.92□□□□□ -1.94
DDX58O95786 AC104383.1-201ENST00000530297 370 ntBASIC2.92□□□□□ -1.94
DDX58O95786 AC023824.2-201ENST00000566185 400 ntBASIC2.92□□□□□ -1.94
DDX58O95786 AP001330.5-201ENST00000607176 411 ntBASIC2.92□□□□□ -1.94
DDX58O95786 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.92□□□□□ -1.94
DDX58O95786 RNU6-91P-201ENST00000607774 107 ntBASIC2.92□□□□□ -1.94
DDX58O95786 AL359198.2-201ENST00000611836 194 ntBASIC2.92□□□□□ -1.94
DDX58O95786 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.92□□□□□ -1.94
DDX58O95786 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
DDX58O95786 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
DDX58O95786 RNU6-384P-201ENST00000364900 104 ntBASIC2.91□□□□□ -1.94
DDX58O95786 U8.8-201ENST00000365399 135 ntBASIC2.91□□□□□ -1.94
DDX58O95786 Y_RNA.372-201ENST00000365599 102 ntBASIC2.91□□□□□ -1.94
DDX58O95786 RNU6-434P-201ENST00000384376 107 ntBASIC2.91□□□□□ -1.94
DDX58O95786 RNU6-220P-201ENST00000390919 107 ntBASIC2.91□□□□□ -1.94
DDX58O95786 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
DDX58O95786 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.91□□□□□ -1.94
DDX58O95786 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
DDX58O95786 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX58O95786 TIMM9P3-201ENST00000428659 274 ntBASIC2.91□□□□□ -1.94
DDX58O95786 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.91□□□□□ -1.94
DDX58O95786 HMGB1P31-201ENST00000437242 427 ntBASIC2.91□□□□□ -1.94
DDX58O95786 CALM1P1-201ENST00000442082 433 ntBASIC2.91□□□□□ -1.94
DDX58O95786 AL353705.4-201ENST00000449661 238 ntBASIC2.91□□□□□ -1.94
DDX58O95786 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
DDX58O95786 FDX1P2-201ENST00000450769 375 ntBASIC2.91□□□□□ -1.94
DDX58O95786 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX58O95786 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX58O95786 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX58O95786 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.91□□□□□ -1.94
DDX58O95786 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX58O95786 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.91□□□□□ -1.94
DDX58O95786 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.91□□□□□ -1.94
DDX58O95786 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX58O95786 AC007336.1-201ENST00000576365 3828 ntBASIC2.91□□□□□ -1.94
DDX58O95786 MIR1273D-201ENST00000577266 86 ntBASIC2.91□□□□□ -1.94
DDX58O95786 AC105245.1-201ENST00000581934 244 ntBASIC2.91□□□□□ -1.94
DDX58O95786 BNIP3P30-201ENST00000601184 574 ntBASIC2.91□□□□□ -1.94
DDX58O95786 AF250324.2-201ENST00000608299 610 ntBASIC2.91□□□□□ -1.94
DDX58O95786 AC010378.1-201ENST00000619270 362 ntBASIC2.91□□□□□ -1.94
DDX58O95786 AL031601.2-202ENST00000622650 282 ntBASIC2.91□□□□□ -1.94
DDX58O95786 AC138627.2-201ENST00000624202 601 ntBASIC2.91□□□□□ -1.94
DDX58O95786 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
DDX58O95786 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.91□□□□□ -1.94
DDX58O95786 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
DDX58O95786 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
DDX58O95786 OR56A5-201ENST00000340110 738 ntBASIC2.9□□□□□ -1.95
DDX58O95786 Y_RNA.3-201ENST00000362331 103 ntBASIC2.9□□□□□ -1.95
DDX58O95786 SNORD114-19-201ENST00000363072 75 ntBASIC2.9□□□□□ -1.95
DDX58O95786 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
DDX58O95786 DEFA7P-201ENST00000382676 285 ntBASIC2.9□□□□□ -1.95
DDX58O95786 SNORD116-20-201ENST00000384529 92 ntBASIC2.9□□□□□ -1.95
DDX58O95786 RNU6-1127P-201ENST00000384580 107 ntBASIC2.9□□□□□ -1.95
DDX58O95786 AL590002.1-201ENST00000406554 418 ntBASIC2.9□□□□□ -1.95
DDX58O95786 U6atac.2-201ENST00000408644 118 ntBASIC2.9□□□□□ -1.95
DDX58O95786 RN7SKP223-201ENST00000410582 62 ntBASIC2.9□□□□□ -1.95
DDX58O95786 UBE2V1P10-201ENST00000414685 269 ntBASIC2.9□□□□□ -1.95
DDX58O95786 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.9□□□□□ -1.95
DDX58O95786 AL669831.1-202ENST00000428504 417 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms