Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC118273.2-201ENST00000532092 465 ntBASIC1.34□□□□□ -2.19
CPSF4O95639 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.34□□□□□ -2.19
CPSF4O95639 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.34□□□□□ -2.19
CPSF4O95639 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.34□□□□□ -2.19
CPSF4O95639 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.34□□□□□ -2.19
CPSF4O95639 AC136619.2-201ENST00000563361 631 ntBASIC1.34□□□□□ -2.19
CPSF4O95639 MIR548AC-201ENST00000585049 88 ntBASIC1.34□□□□□ -2.19
CPSF4O95639 AL713866.2-201ENST00000603579 219 ntBASIC1.34□□□□□ -2.19
CPSF4O95639 AL645939.4-201ENST00000604495 135 ntBASIC1.34□□□□□ -2.19
CPSF4O95639 AL139286.2-201ENST00000606838 396 ntBASIC1.34□□□□□ -2.19
CPSF4O95639 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.34□□□□□ -2.19
CPSF4O95639 AC093788.1-201ENST00000609356 927 ntBASIC1.34□□□□□ -2.19
CPSF4O95639 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.34□□□□□ -2.19
CPSF4O95639 AL157786.1-207ENST00000627771 695 ntBASIC1.34□□□□□ -2.19
CPSF4O95639 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.34□□□□□ -2.19
CPSF4O95639 MTND4P4-201ENST00000439033 1366 ntBASIC1.34□□□□□ -2.2
CPSF4O95639 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CPSF4O95639 AC008555.8-201ENST00000623602 2168 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 RNA5SP276-201ENST00000362580 94 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 SNORA20.2-201ENST00000383922 131 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 RNU6-1032P-201ENST00000384100 107 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 RNU6-843P-201ENST00000384454 104 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AC127391.1-201ENST00000411737 98 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 OOSP1P1-201ENST00000423265 274 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.33□□□□□ -2.2
CPSF4O95639 AL161788.1-201ENST00000441805 169 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 CALM1P1-201ENST00000442082 433 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 NDUFB1P2-201ENST00000449477 176 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.33□□□□□ -2.2
CPSF4O95639 CYP2C59P-201ENST00000457790 269 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AC117503.1-201ENST00000472241 394 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 FO393415.2-201ENST00000480085 343 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AC107032.1-201ENST00000485945 480 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.33□□□□□ -2.2
CPSF4O95639 SCARNA24.1-201ENST00000516465 137 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.33□□□□□ -2.2
CPSF4O95639 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.33□□□□□ -2.2
CPSF4O95639 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.33□□□□□ -2.2
CPSF4O95639 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.33□□□□□ -2.2
CPSF4O95639 PSMA3P-201ENST00000555485 635 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 MTATP6P24-201ENST00000576835 677 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 MIR4529-201ENST00000578110 78 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AC005771.1-201ENST00000585581 349 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AC008521.1-201ENST00000587471 187 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AL138889.2-201ENST00000603883 242 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AC025811.1-201ENST00000604312 472 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 NDUFA8P1-201ENST00000605525 367 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AL121992.2-201ENST00000606262 256 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AC096772.1-201ENST00000609146 564 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AL360219.1-201ENST00000610230 366 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AL627230.6-201ENST00000611129 280 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AC022202.1-201ENST00000613515 211 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AC122133.1-201ENST00000613964 233 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 U6.42-201ENST00000618440 107 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AC023510.2-201ENST00000622162 746 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AF246928.1-201ENST00000623768 87 ntBASIC1.33□□□□□ -2.2
CPSF4O95639 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.33□□□□□ -2.2
CPSF4O95639 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.33□□□□□ -2.2
CPSF4O95639 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CPSF4O95639 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
CPSF4O95639 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CPSF4O95639 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CPSF4O95639 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 SNORD114-19-201ENST00000363072 75 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 U8.3-201ENST00000363321 132 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 RNY1P12-201ENST00000364251 105 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 RNU6-384P-201ENST00000364900 104 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 RNU6-169P-201ENST00000365336 107 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 RNA5SP240-201ENST00000365355 128 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 RNU6-61P-201ENST00000365528 109 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CPSF4O95639 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CPSF4O95639 RNU6-1179P-201ENST00000384667 107 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 MIR95-201ENST00000385072 81 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CPSF4O95639 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CPSF4O95639 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.32□□□□□ -2.2
CPSF4O95639 RNU6-174P-201ENST00000410406 106 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 RNU2-8P-201ENST00000410727 190 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CPSF4O95639 AC138623.1-201ENST00000418060 216 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 AC008267.5-201ENST00000424928 265 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 CALM2P2-201ENST00000428512 440 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 MTND5P25-201ENST00000430499 799 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 MTATP6P16-201ENST00000434543 526 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.32□□□□□ -2.2
CPSF4O95639 HMGB1P18-201ENST00000438801 619 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 AC009238.1-201ENST00000442165 424 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 MTND6P13-201ENST00000443510 523 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 AC009237.6-201ENST00000446969 424 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 AL360271.2-201ENST00000447710 161 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 snoU13.26-201ENST00000459452 105 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 HMGB1P30-201ENST00000492455 606 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.32□□□□□ -2.2
CPSF4O95639 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.32□□□□□ -2.2
CPSF4O95639 MTND1P22-201ENST00000510572 951 ntBASIC1.32□□□□□ -2.2
CPSF4O95639 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.32□□□□□ -2.2
CPSF4O95639 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.32□□□□□ -2.2
CPSF4O95639 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms