Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC123912.5-201ENST00000605470 343 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.56□□□□□ -1.84
CDKL5O76039 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDKL5O76039 AC004925.1-201ENST00000624256 2706 ntBASIC3.56□□□□□ -1.84
CDKL5O76039 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
CDKL5O76039 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.55□□□□□ -1.84
CDKL5O76039 Y_RNA.47-201ENST00000362697 108 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 Y_RNA.193-201ENST00000363979 102 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 SNORA38.1-201ENST00000364172 131 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 Y_RNA.324-201ENST00000365165 102 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 Y_RNA.428-201ENST00000384078 102 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 SNORD67-201ENST00000390833 111 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 AL445529.1-201ENST00000398713 389 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 AC096664.2-201ENST00000411843 406 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.55□□□□□ -1.84
CDKL5O76039 RPL23AP50-201ENST00000434149 455 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 AC128713.1-201ENST00000471495 306 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 RN7SKP43-201ENST00000516173 320 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 SNORD116.3-201ENST00000517176 78 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 SNORA31.26-201ENST00000517250 137 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.55□□□□□ -1.84
CDKL5O76039 AL157871.3-201ENST00000557231 293 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.55□□□□□ -1.84
CDKL5O76039 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.55□□□□□ -1.84
CDKL5O76039 VN1R107P-201ENST00000601784 209 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 AC092447.9-201ENST00000603395 144 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 AC104695.3-201ENST00000604052 296 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 AL160281.1-201ENST00000605307 311 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 AC069200.1-201ENST00000609511 323 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 AC107294.1-201ENST00000609524 467 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 AL360181.4-201ENST00000621752 134 ntBASIC3.55□□□□□ -1.84
CDKL5O76039 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CDKL5O76039 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDKL5O76039 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.54□□□□□ -1.84
CDKL5O76039 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDKL5O76039 Y_RNA.80-201ENST00000362996 102 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 Y_RNA.153-201ENST00000363615 91 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 RNU1-115P-201ENST00000365329 160 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 Y_RNA.455-201ENST00000384230 98 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 AC096644.2-201ENST00000429278 159 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 AL133396.1-201ENST00000432048 687 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.54□□□□□ -1.84
CDKL5O76039 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.54□□□□□ -1.84
CDKL5O76039 RPL21P104-201ENST00000464143 478 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 RPL7P49-201ENST00000471402 708 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.54□□□□□ -1.84
CDKL5O76039 HMGB1P30-201ENST00000492455 606 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 AC015911.1-201ENST00000495111 156 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.54□□□□□ -1.84
CDKL5O76039 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.54□□□□□ -1.84
CDKL5O76039 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.54□□□□□ -1.84
CDKL5O76039 MED28P6-201ENST00000558776 231 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 AC004817.2-201ENST00000561794 651 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.54□□□□□ -1.84
CDKL5O76039 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.54□□□□□ -1.84
CDKL5O76039 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDKL5O76039 MIR1273C-201ENST00000578669 77 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 AC113195.1-201ENST00000579952 141 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 7SK.7-201ENST00000603504 247 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 AC006023.2-201ENST00000609916 167 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 Z69720.2-201ENST00000624755 279 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 AC005592.1-201ENST00000566527 1640 ntBASIC3.54□□□□□ -1.84
CDKL5O76039 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CDKL5O76039 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CDKL5O76039 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.53□□□□□ -1.84
CDKL5O76039 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.53□□□□□ -1.84
CDKL5O76039 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.53□□□□□ -1.84
CDKL5O76039 AL035425.3-201ENST00000564206 4996 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 AC073325.2-201ENST00000339545 159 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 DEFB108F-201ENST00000344638 222 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 MIR22-201ENST00000362190 85 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 RNU6-600P-201ENST00000362524 99 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 Y_RNA.149-201ENST00000363558 117 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 Y_RNA.401-201ENST00000383965 117 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 Y_RNA.485-201ENST00000384395 102 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 SNORA41-201ENST00000384675 132 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CDKL5O76039 AL030996.1-201ENST00000411430 235 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 Z85995.1-201ENST00000415547 335 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 EI24P1-201ENST00000416584 867 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.53□□□□□ -1.84
CDKL5O76039 RPL21P40-201ENST00000428586 483 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 SSXP4-201ENST00000451349 245 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 PCMTD1P1-201ENST00000455560 355 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.53□□□□□ -1.84
CDKL5O76039 RN7SL75P-201ENST00000461926 281 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 RPS23P3-201ENST00000470993 430 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 RN7SL633P-201ENST00000488974 297 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 RN7SL504P-201ENST00000494496 287 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 AC116655.1-201ENST00000508324 901 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 AC113155.1-201ENST00000511141 769 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 RNU6-1256P-201ENST00000516539 103 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 RNU6-307P-201ENST00000516743 106 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 RN7SKP272-201ENST00000516988 232 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.53□□□□□ -1.84
CDKL5O76039 AC084851.1-201ENST00000529105 249 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 AC023442.1-201ENST00000531247 422 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms