Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RNU6-929P-201ENST00000384429 107 ntBASIC-0.1□□□□□ -2.42
USH2AO75445 AL590632.1-201ENST00000424289 371 ntBASIC-0.1□□□□□ -2.42
USH2AO75445 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC-0.1□□□□□ -2.42
USH2AO75445 AC104136.1-201ENST00000512969 394 ntBASIC-0.1□□□□□ -2.42
USH2AO75445 RNA5SP112-201ENST00000515937 99 ntBASIC-0.1□□□□□ -2.42
USH2AO75445 SNORA31.8-201ENST00000516327 108 ntBASIC-0.1□□□□□ -2.42
USH2AO75445 RNU6-980P-201ENST00000516925 103 ntBASIC-0.1□□□□□ -2.42
USH2AO75445 AC105185.1-201ENST00000518705 535 ntBASIC-0.1□□□□□ -2.42
USH2AO75445 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.1□□□□□ -2.42
USH2AO75445 AC021231.3-201ENST00000558497 370 ntBASIC-0.1□□□□□ -2.42
USH2AO75445 AC112220.2-201ENST00000605513 533 ntBASIC-0.1□□□□□ -2.42
USH2AO75445 AC064807.4-201ENST00000607201 407 ntBASIC-0.1□□□□□ -2.42
USH2AO75445 ZNF680P1-201ENST00000436625 1469 ntBASIC-0.1□□□□□ -2.42
USH2AO75445 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 U3.20-201ENST00000390909 217 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
USH2AO75445 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
USH2AO75445 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
USH2AO75445 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC-0.1□□□□□ -2.43
USH2AO75445 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC-0.1□□□□□ -2.43
USH2AO75445 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC-0.1□□□□□ -2.43
USH2AO75445 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC-0.1□□□□□ -2.43
USH2AO75445 AC116347.2-201ENST00000514912 523 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 AC104057.1-201ENST00000515547 497 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
USH2AO75445 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.1□□□□□ -2.43
USH2AO75445 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.1□□□□□ -2.43
USH2AO75445 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.1□□□□□ -2.43
USH2AO75445 AL590240.4-201ENST00000616908 390 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0.1□□□□□ -2.43
USH2AO75445 LINC02555-201ENST00000563933 1951 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
USH2AO75445 AC090625.1-201ENST00000357130 210 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 MIR412-201ENST00000362142 91 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 RNA5SP93-201ENST00000362525 114 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 RNA5SP219-201ENST00000390940 113 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 RPS15AP27-201ENST00000449183 343 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.1□□□□□ -2.43
USH2AO75445 AC104108.1-201ENST00000509930 412 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 RNU4-54P-201ENST00000516428 129 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 SNORA48.10-201ENST00000516965 160 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 AC023157.2-201ENST00000540596 141 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.1□□□□□ -2.43
USH2AO75445 AC103705.1-201ENST00000619013 241 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 MIR6828-201ENST00000636181 60 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 RNU2-36P-201ENST00000410361 191 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.1□□□□□ -2.43
USH2AO75445 AC093534.1-201ENST00000504977 132 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 RNU6-902P-201ENST00000517212 91 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 AP002453.2-201ENST00000533503 320 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC-0.1□□□□□ -2.43
USH2AO75445 RNY1P7-201ENST00000384743 110 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
USH2AO75445 SSR1P2-201ENST00000415208 787 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 DAP3P1-201ENST00000441522 278 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 AC092685.1-201ENST00000447960 1243 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC-0.1□□□□□ -2.43
USH2AO75445 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.1□□□□□ -2.43
USH2AO75445 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC-0.1□□□□□ -2.43
USH2AO75445 MED28P6-201ENST00000558776 231 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 AC004805.2-201ENST00000605382 482 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 AC080013.4-201ENST00000607624 649 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 FTX_2.1-201ENST00000618816 94 ntBASIC-0.1□□□□□ -2.43
USH2AO75445 MT-TM-201ENST00000387377 68 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.11□□□□□ -2.43
USH2AO75445 TRGV6-201ENST00000417928 299 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.11□□□□□ -2.43
USH2AO75445 RPS29P27-201ENST00000463711 170 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AC010631.1-201ENST00000474150 156 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 RPL7P43-201ENST00000478876 753 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 HMGB1P30-201ENST00000492455 606 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.11□□□□□ -2.43
USH2AO75445 MIR892C-201ENST00000516410 77 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 RNU6-1073P-201ENST00000517182 106 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.11□□□□□ -2.43
USH2AO75445 AC022523.2-201ENST00000561045 150 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 MIR5697-201ENST00000578045 78 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC-0.11□□□□□ -2.43
USH2AO75445 AC012507.3-201ENST00000603556 477 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AC025588.2-201ENST00000604851 466 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AC018638.7-201ENST00000605836 1114 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AL078604.3-201ENST00000615580 211 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
USH2AO75445 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
USH2AO75445 RNU2-7P-201ENST00000410794 178 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.11□□□□□ -2.43
USH2AO75445 AC016925.1-201ENST00000458303 298 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC-0.11□□□□□ -2.43
USH2AO75445 LRRC34P1-201ENST00000542742 915 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.11□□□□□ -2.43
USH2AO75445 AC008536.2-201ENST00000607284 349 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 MIR7515-201ENST00000637837 67 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 MIR548L-201ENST00000408303 86 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms