Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SNX3O60493 AC138393.1-203ENST00000327086 343 ntBASIC2.41□□□□□ -2.02
SNX3O60493 RNU6-451P-201ENST00000362921 107 ntBASIC2.41□□□□□ -2.02
SNX3O60493 RNU6-82P-201ENST00000363970 107 ntBASIC2.41□□□□□ -2.02
SNX3O60493 SNORA38.1-201ENST00000364172 131 ntBASIC2.41□□□□□ -2.02
SNX3O60493 Y_RNA.231-201ENST00000364358 102 ntBASIC2.41□□□□□ -2.02
SNX3O60493 SNORD115-47-201ENST00000391226 86 ntBASIC2.41□□□□□ -2.02
SNX3O60493 OR9R1P-201ENST00000412200 877 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.41□□□□□ -2.02
SNX3O60493 SNORD56-201ENST00000413522 71 ntBASIC2.41□□□□□ -2.02
SNX3O60493 MTND1P23-201ENST00000416931 372 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AC074117.2-201ENST00000417130 397 ntBASIC2.41□□□□□ -2.02
SNX3O60493 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.41□□□□□ -2.02
SNX3O60493 RPL30P4-201ENST00000429309 333 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AL365400.1-201ENST00000431854 640 ntBASIC2.41□□□□□ -2.02
SNX3O60493 MTND1P4-201ENST00000435196 415 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.41□□□□□ -2.02
SNX3O60493 AL445687.1-201ENST00000439946 251 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AL671855.1-201ENST00000446875 1203 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AL031659.1-201ENST00000447075 539 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AC012308.1-201ENST00000451232 178 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AC117503.1-201ENST00000472241 394 ntBASIC2.41□□□□□ -2.02
SNX3O60493 RPL38P4-201ENST00000502376 214 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AC091885.1-201ENST00000506658 268 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AC108043.1-201ENST00000512696 574 ntBASIC2.41□□□□□ -2.02
SNX3O60493 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.41□□□□□ -2.02
SNX3O60493 RNU6-189P-201ENST00000516120 101 ntBASIC2.41□□□□□ -2.02
SNX3O60493 SCARNA3-201ENST00000517097 143 ntBASIC2.41□□□□□ -2.02
SNX3O60493 RN7SKP40-201ENST00000517211 242 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.41□□□□□ -2.02
SNX3O60493 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.41□□□□□ -2.02
SNX3O60493 AC079600.2-201ENST00000550076 130 ntBASIC2.41□□□□□ -2.02
SNX3O60493 MIR3941-201ENST00000582572 103 ntBASIC2.41□□□□□ -2.02
SNX3O60493 RPS15AP11-201ENST00000594193 385 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AC012493.2-201ENST00000595083 291 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AL356280.1-201ENST00000603614 379 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AL121917.1-203ENST00000605534 577 ntBASIC2.41□□□□□ -2.02
SNX3O60493 RNU6-89P-201ENST00000606519 100 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AC092807.2-201ENST00000609367 243 ntBASIC2.41□□□□□ -2.02
SNX3O60493 AC090517.2-201ENST00000614966 680 ntBASIC2.41□□□□□ -2.02
SNX3O60493 U4.7-201ENST00000638126 106 ntBASIC2.41□□□□□ -2.02
SNX3O60493 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.4□□□□□ -2.02
SNX3O60493 Z75746.1-201ENST00000440243 2080 ntBASIC2.4□□□□□ -2.02
SNX3O60493 MTND4P27-201ENST00000450813 1354 ntBASIC2.4□□□□□ -2.02
SNX3O60493 Y_RNA.505-201ENST00000384489 102 ntBASIC2.4□□□□□ -2.03
SNX3O60493 RNU6-220P-201ENST00000390919 107 ntBASIC2.4□□□□□ -2.03
SNX3O60493 SNORA48.7-201ENST00000391302 135 ntBASIC2.4□□□□□ -2.03
SNX3O60493 EEF1A1P41-201ENST00000414667 207 ntBASIC2.4□□□□□ -2.03
SNX3O60493 AC097463.2-201ENST00000421074 142 ntBASIC2.4□□□□□ -2.03
SNX3O60493 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.4□□□□□ -2.03
SNX3O60493 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.4□□□□□ -2.03
SNX3O60493 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.4□□□□□ -2.03
SNX3O60493 UBE2V1P8-201ENST00000437166 265 ntBASIC2.4□□□□□ -2.03
SNX3O60493 AC096576.1-201ENST00000489014 359 ntBASIC2.4□□□□□ -2.03
SNX3O60493 Y_RNA.654-201ENST00000497848 106 ntBASIC2.4□□□□□ -2.03
SNX3O60493 AC079140.5-201ENST00000507882 310 ntBASIC2.4□□□□□ -2.03
SNX3O60493 AC023141.11-201ENST00000508864 202 ntBASIC2.4□□□□□ -2.03
SNX3O60493 AC011352.1-201ENST00000512300 793 ntBASIC2.4□□□□□ -2.03
SNX3O60493 RNA5SP112-201ENST00000515937 99 ntBASIC2.4□□□□□ -2.03
SNX3O60493 SNORA14.1-201ENST00000516113 141 ntBASIC2.4□□□□□ -2.03
SNX3O60493 RNU6-718P-201ENST00000516166 105 ntBASIC2.4□□□□□ -2.03
SNX3O60493 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
SNX3O60493 RNA5SP82-201ENST00000516707 92 ntBASIC2.4□□□□□ -2.03
SNX3O60493 CYCSP27-201ENST00000527643 293 ntBASIC2.4□□□□□ -2.03
SNX3O60493 AC079598.5-201ENST00000547460 117 ntBASIC2.4□□□□□ -2.03
SNX3O60493 AC146944.4-201ENST00000602697 718 ntBASIC2.4□□□□□ -2.03
SNX3O60493 AC067747.1-201ENST00000608026 250 ntBASIC2.4□□□□□ -2.03
SNX3O60493 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.4□□□□□ -2.03
SNX3O60493 AC103705.1-201ENST00000619013 241 ntBASIC2.4□□□□□ -2.03
SNX3O60493 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.4□□□□□ -2.03
SNX3O60493 MIR7157-201ENST00000635801 60 ntBASIC2.4□□□□□ -2.03
SNX3O60493 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
SNX3O60493 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.4□□□□□ -2.03
SNX3O60493 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
SNX3O60493 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SNX3O60493 SNORD56.1-201ENST00000362913 68 ntBASIC2.39□□□□□ -2.03
SNX3O60493 RNU6-486P-201ENST00000363116 107 ntBASIC2.39□□□□□ -2.03
SNX3O60493 Y_RNA.167-201ENST00000363735 109 ntBASIC2.39□□□□□ -2.03
SNX3O60493 RNU6-622P-201ENST00000384272 103 ntBASIC2.39□□□□□ -2.03
SNX3O60493 MIR9-1-201ENST00000385198 89 ntBASIC2.39□□□□□ -2.03
SNX3O60493 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.39□□□□□ -2.03
SNX3O60493 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.39□□□□□ -2.03
SNX3O60493 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.39□□□□□ -2.03
SNX3O60493 BX276092.3-201ENST00000424182 230 ntBASIC2.39□□□□□ -2.03
SNX3O60493 USP9YP18-201ENST00000425912 695 ntBASIC2.39□□□□□ -2.03
SNX3O60493 ERLEC1P1-201ENST00000433806 578 ntBASIC2.39□□□□□ -2.03
SNX3O60493 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.39□□□□□ -2.03
SNX3O60493 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.39□□□□□ -2.03
SNX3O60493 RNU6-1208P-201ENST00000459588 107 ntBASIC2.39□□□□□ -2.03
SNX3O60493 AC104435.1-201ENST00000483483 166 ntBASIC2.39□□□□□ -2.03
SNX3O60493 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.39□□□□□ -2.03
SNX3O60493 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.39□□□□□ -2.03
SNX3O60493 SMURF2P1-201ENST00000514992 481 ntBASIC2.39□□□□□ -2.03
SNX3O60493 SNORA31.18-201ENST00000517043 134 ntBASIC2.39□□□□□ -2.03
SNX3O60493 AC069113.1-201ENST00000517763 267 ntBASIC2.39□□□□□ -2.03
SNX3O60493 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.39□□□□□ -2.03
SNX3O60493 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.39□□□□□ -2.03
SNX3O60493 AC136619.2-201ENST00000563361 631 ntBASIC2.39□□□□□ -2.03
SNX3O60493 RNU6-85P-201ENST00000605989 107 ntBASIC2.39□□□□□ -2.03
SNX3O60493 AC084782.3-201ENST00000612282 578 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms