Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 AC007318.2-201ENST00000620999 243 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 MIR3199-2-201ENST00000636243 86 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.74□□□□□ -1.97
ZIC3O60481 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.74□□□□□ -1.97
ZIC3O60481 AC103988.1-201ENST00000566382 2177 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 SNORD62.1-201ENST00000362541 86 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 Y_RNA.58-201ENST00000362807 102 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 Y_RNA.67-201ENST00000362870 100 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 U3.6-201ENST00000363622 211 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 Y_RNA.154-201ENST00000363624 102 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 RNY3P1-201ENST00000365085 102 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 RNU6-1280P-201ENST00000365211 107 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 RNY3-201ENST00000365484 102 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 Y_RNA.490-201ENST00000384413 102 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 Y_RNA.535-201ENST00000384612 99 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 SAR1AP2-201ENST00000392696 594 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 FTH1P15-201ENST00000406984 280 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
ZIC3O60481 AL030996.1-201ENST00000411430 235 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ZIC3O60481 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.73□□□□□ -1.97
ZIC3O60481 AC117440.1-201ENST00000474107 571 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 RNU6-377P-201ENST00000515965 102 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 AC068657.1-201ENST00000520807 306 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.73□□□□□ -1.97
ZIC3O60481 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.73□□□□□ -1.97
ZIC3O60481 HPRT1P3-201ENST00000539521 576 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.73□□□□□ -1.97
ZIC3O60481 AC103996.1-201ENST00000555468 102 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 AL121821.2-201ENST00000556081 394 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.73□□□□□ -1.97
ZIC3O60481 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.73□□□□□ -1.97
ZIC3O60481 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 AC005046.1-201ENST00000608515 625 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 AC244517.12-201ENST00000623581 663 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 AL359757.2-201ENST00000624309 274 ntBASIC2.73□□□□□ -1.97
ZIC3O60481 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ZIC3O60481 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ZIC3O60481 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ZIC3O60481 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.72□□□□□ -1.97
ZIC3O60481 RNU6-428P-201ENST00000362942 107 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 Y_RNA.384-201ENST00000383909 102 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 Y_RNA.482-201ENST00000384377 111 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 RNU2-49P-201ENST00000410666 184 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.72□□□□□ -1.97
ZIC3O60481 RPL21P40-201ENST00000428586 483 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.72□□□□□ -1.97
ZIC3O60481 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.72□□□□□ -1.97
ZIC3O60481 AL161651.1-201ENST00000440882 223 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.72□□□□□ -1.97
ZIC3O60481 NIPA2P5-201ENST00000452282 464 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.72□□□□□ -1.97
ZIC3O60481 AC006026.2-201ENST00000457376 180 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 Y_RNA.632-201ENST00000459189 102 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 RNU6-1037P-201ENST00000459571 107 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 MRPL42P6-201ENST00000486397 371 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.72□□□□□ -1.97
ZIC3O60481 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.72□□□□□ -1.97
ZIC3O60481 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.72□□□□□ -1.97
ZIC3O60481 RN7SKP272-201ENST00000516988 232 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 CR383656.8-201ENST00000549046 145 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.72□□□□□ -1.97
ZIC3O60481 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.72□□□□□ -1.97
ZIC3O60481 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.72□□□□□ -1.97
ZIC3O60481 AC073544.1-201ENST00000600110 1595 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 AL133393.1-201ENST00000603277 287 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
ZIC3O60481 AL161423.1-201ENST00000613700 262 ntBASIC2.72□□□□□ -1.97
ZIC3O60481 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.72□□□□□ -1.97
ZIC3O60481 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ZIC3O60481 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.72□□□□□ -1.97
ZIC3O60481 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ZIC3O60481 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
ZIC3O60481 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
ZIC3O60481 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.71□□□□□ -1.97
ZIC3O60481 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
ZIC3O60481 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.71□□□□□ -1.98
ZIC3O60481 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ZIC3O60481 AC006026.1-201ENST00000444025 1803 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
ZIC3O60481 Y_RNA.11-201ENST00000362375 109 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 Y_RNA.151-201ENST00000363566 112 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 RNU6-593P-201ENST00000364716 112 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 RNU6-336P-201ENST00000364891 107 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
ZIC3O60481 RPS29P13-201ENST00000402041 169 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 AC116337.1-201ENST00000509680 687 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.71□□□□□ -1.98
ZIC3O60481 RNU6-559P-201ENST00000516151 98 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.71□□□□□ -1.98
ZIC3O60481 AC022080.3-201ENST00000544433 482 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.71□□□□□ -1.98
ZIC3O60481 FRG2DP-202ENST00000566967 323 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 CPDP1-201ENST00000579660 283 ntBASIC2.71□□□□□ -1.98
ZIC3O60481 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.71□□□□□ -1.98
ZIC3O60481 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.71□□□□□ -1.98
ZIC3O60481 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.71□□□□□ -1.98
ZIC3O60481 AC009314.1-201ENST00000603871 304 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms