Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AL354695.1-201ENST00000427935 228 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 AL512286.1-201ENST00000439244 400 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.69□□□□□ -2.14
CHMP2AO43633 RNU6-1315P-201ENST00000517187 99 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.69□□□□□ -2.14
CHMP2AO43633 AP003461.1-201ENST00000528866 78 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.69□□□□□ -2.14
CHMP2AO43633 DNAJC19P9-201ENST00000555084 351 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.69□□□□□ -2.14
CHMP2AO43633 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.69□□□□□ -2.14
CHMP2AO43633 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.69□□□□□ -2.14
CHMP2AO43633 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.69□□□□□ -2.14
CHMP2AO43633 AC073410.2-201ENST00000603240 332 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 AC121334.2-201ENST00000605387 271 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 AL158032.1-201ENST00000605401 106 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 AC021646.1-201ENST00000605469 484 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 AC096772.1-201ENST00000609146 564 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.69□□□□□ -2.14
CHMP2AO43633 AL359314.1-201ENST00000616913 261 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 AC090517.3-201ENST00000625170 141 ntBASIC1.69□□□□□ -2.14
CHMP2AO43633 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.69□□□□□ -2.14
CHMP2AO43633 RBBP8P1-201ENST00000449447 1844 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 RNU6-500P-201ENST00000362349 107 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 RNU4-13P-201ENST00000364019 141 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 RNU4-42P-201ENST00000364738 142 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 RNU6-190P-201ENST00000384154 102 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 RNU6-997P-201ENST00000384725 107 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 MIR597-201ENST00000384968 97 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 RNU11-3P-201ENST00000391111 133 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 RNA5SP212-201ENST00000391223 107 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 RNU2-48P-201ENST00000410694 191 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 VN1R36P-201ENST00000414936 291 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 RPL23AP30-201ENST00000432419 501 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.68□□□□□ -2.14
CHMP2AO43633 HMGB1P31-201ENST00000437242 427 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AL603825.1-201ENST00000438481 80 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 MTND5P2-201ENST00000442927 1142 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.68□□□□□ -2.14
CHMP2AO43633 AC023790.1-201ENST00000482174 347 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.68□□□□□ -2.14
CHMP2AO43633 AC010587.1-201ENST00000505809 469 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.68□□□□□ -2.14
CHMP2AO43633 RNU2-53P-201ENST00000516257 147 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 SNORA31.24-201ENST00000517232 57 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 IMMP1LP2-201ENST00000552954 492 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AL157871.3-201ENST00000557231 293 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.68□□□□□ -2.14
CHMP2AO43633 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.68□□□□□ -2.14
CHMP2AO43633 AL670379.6-201ENST00000603753 252 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AL670379.11-201ENST00000604059 253 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AC008162.1-201ENST00000604718 254 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AL670379.1-201ENST00000604752 252 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AL670379.5-201ENST00000605253 252 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AL670379.12-201ENST00000605291 253 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AL670379.8-201ENST00000605353 252 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 BNIP3P10-201ENST00000605360 577 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AL670379.7-201ENST00000605823 252 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AC103810.8-201ENST00000607347 118 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 AC004908.3-201ENST00000610248 625 ntBASIC1.68□□□□□ -2.14
CHMP2AO43633 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CHMP2AO43633 SNORD56.2-201ENST00000363242 71 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 RNU6-501P-201ENST00000364072 100 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
CHMP2AO43633 MIR301A-201ENST00000385261 86 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 RNU2-62P-201ENST00000410868 191 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 BTF3P4-201ENST00000418852 495 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 AL356583.2-201ENST00000426536 280 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 AL589872.1-201ENST00000426602 288 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 MTND2P29-201ENST00000438595 412 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.67□□□□□ -2.14
CHMP2AO43633 SNORD11.1-201ENST00000459482 85 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 RBBP4P6-201ENST00000508098 202 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 RN7SKP265-201ENST00000516448 223 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 RNU6-677P-201ENST00000516914 101 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.67□□□□□ -2.14
CHMP2AO43633 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.67□□□□□ -2.14
CHMP2AO43633 AP003392.2-201ENST00000527269 208 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 AP000763.2-201ENST00000540641 163 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.67□□□□□ -2.14
CHMP2AO43633 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.67□□□□□ -2.14
CHMP2AO43633 MIR4713-201ENST00000582691 75 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 AC234772.3-201ENST00000602277 528 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 uc_338.5-201ENST00000611839 155 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 WWP1P1-201ENST00000466609 2769 ntBASIC1.67□□□□□ -2.14
CHMP2AO43633 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CHMP2AO43633 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
CHMP2AO43633 MIR378A-201ENST00000362177 66 ntBASIC1.66□□□□□ -2.14
CHMP2AO43633 MIR126-201ENST00000362291 85 ntBASIC1.66□□□□□ -2.14
CHMP2AO43633 RNU6-234P-201ENST00000365229 104 ntBASIC1.66□□□□□ -2.14
CHMP2AO43633 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
CHMP2AO43633 Y_RNA.608-201ENST00000410647 95 ntBASIC1.66□□□□□ -2.14
CHMP2AO43633 RNU2-32P-201ENST00000411193 191 ntBASIC1.66□□□□□ -2.14
CHMP2AO43633 POLHP1-201ENST00000411806 470 ntBASIC1.66□□□□□ -2.14
CHMP2AO43633 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.66□□□□□ -2.14
CHMP2AO43633 IFNA20P-201ENST00000436840 528 ntBASIC1.66□□□□□ -2.14
CHMP2AO43633 RNU7-125P-201ENST00000458760 62 ntBASIC1.66□□□□□ -2.14
CHMP2AO43633 RNU6-953P-201ENST00000459154 107 ntBASIC1.66□□□□□ -2.14
CHMP2AO43633 SNORD97-201ENST00000459187 142 ntBASIC1.66□□□□□ -2.14
CHMP2AO43633 RAP1BP2-201ENST00000478270 544 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms