Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL450472.3-201ENST00000615578 367 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 AL138880.2-201ENST00000616214 239 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 AL162373.1-201ENST00000620433 407 ntBASIC3.09□□□□□ -1.91
SMAD6O43541 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.09□□□□□ -1.92
SMAD6O43541 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
SMAD6O43541 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SMAD6O43541 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SMAD6O43541 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SMAD6O43541 Y_RNA.47-201ENST00000362697 108 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 RNU6-1155P-201ENST00000363554 107 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 RNU6-1318P-201ENST00000365389 103 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 SNORA44-201ENST00000384584 132 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 RNU6-306P-201ENST00000384617 107 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 RNU6-95P-201ENST00000384697 107 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 MIR23A-201ENST00000385245 73 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 UBA52P6-201ENST00000399822 382 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 AC114482.1-201ENST00000418010 247 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.08□□□□□ -1.92
SMAD6O43541 AC004866.2-201ENST00000438285 481 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 AL731563.1-201ENST00000442202 214 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 GSTA11P-201ENST00000452866 669 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.08□□□□□ -1.92
SMAD6O43541 RN7SL20P-201ENST00000488827 297 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 HMGB1P30-201ENST00000492455 606 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.08□□□□□ -1.92
SMAD6O43541 RNU6-1095P-201ENST00000516148 108 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 RNU6-699P-201ENST00000517081 110 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 AC078899.3-201ENST00000599065 212 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 U4.1-201ENST00000620349 87 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 CDC27P3-201ENST00000635418 1910 ntBASIC3.08□□□□□ -1.92
SMAD6O43541 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMAD6O43541 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMAD6O43541 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMAD6O43541 MIR148B-201ENST00000362252 99 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 RNU6-173P-201ENST00000364215 104 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 RNU6-14P-201ENST00000384630 106 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 NDUFB4P4-201ENST00000404822 243 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 RPL32P35-201ENST00000415214 394 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.07□□□□□ -1.92
SMAD6O43541 AL591704.1-201ENST00000432574 275 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 AC090774.1-201ENST00000435925 246 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 AC117440.1-201ENST00000474107 571 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 RNU6-470P-201ENST00000515954 104 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 RNU6-120P-201ENST00000516077 103 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.07□□□□□ -1.92
SMAD6O43541 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.07□□□□□ -1.92
SMAD6O43541 AC174048.1-201ENST00000603389 144 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 AC104763.2-201ENST00000604179 382 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 NUTF2P8-201ENST00000604593 363 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 AL359547.2-201ENST00000615810 418 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 AC007318.2-201ENST00000620999 243 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.07□□□□□ -1.92
SMAD6O43541 Z69720.2-201ENST00000624755 279 ntBASIC3.07□□□□□ -1.92
SMAD6O43541 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMAD6O43541 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.06□□□□□ -1.92
SMAD6O43541 MT-TR-201ENST00000387439 65 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SMAD6O43541 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMAD6O43541 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.06□□□□□ -1.92
SMAD6O43541 NUP35P1-201ENST00000422734 947 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 PPP1R11P2-201ENST00000423543 382 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 AC008267.5-201ENST00000424928 265 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 AC096644.2-201ENST00000429278 159 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.06□□□□□ -1.92
SMAD6O43541 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.06□□□□□ -1.92
SMAD6O43541 AC128713.1-201ENST00000471495 306 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 AC026801.1-201ENST00000497178 464 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.06□□□□□ -1.92
SMAD6O43541 RNA5SP384-201ENST00000516615 116 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 RNU6-677P-201ENST00000516914 101 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 RN7SKP272-201ENST00000516988 232 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.06□□□□□ -1.92
SMAD6O43541 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMAD6O43541 AC245166.1-201ENST00000521012 253 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 CYCSP27-201ENST00000527643 293 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.06□□□□□ -1.92
SMAD6O43541 AC025423.5-201ENST00000550230 219 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 AC026371.1-201ENST00000551867 419 ntBASIC3.06□□□□□ -1.92
SMAD6O43541 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.06□□□□□ -1.92
SMAD6O43541 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.06□□□□□ -1.92
SMAD6O43541 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SMAD6O43541 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SMAD6O43541 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.05□□□□□ -1.92
SMAD6O43541 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SMAD6O43541 SNORD62.1-201ENST00000362541 86 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 RNU6-288P-201ENST00000363690 104 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 RNU6-1059P-201ENST00000363752 98 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 RNU6-1303P-201ENST00000364841 107 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 RNU6-45P-201ENST00000384471 107 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 RNA5SP252-201ENST00000391131 119 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 MIR1302-3-201ENST00000408128 138 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 RNU2-43P-201ENST00000410306 190 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 AL160275.3-201ENST00000423876 471 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.05□□□□□ -1.92
SMAD6O43541 CBX3P6-201ENST00000430257 527 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 USP9YP30-201ENST00000430729 455 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 AL359672.1-201ENST00000442302 409 ntBASIC3.05□□□□□ -1.92
SMAD6O43541 RPL37P4-201ENST00000448908 268 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms