Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC117440.1-201ENST00000474107 571 ntBASIC3.48□□□□□ -1.85
PRPF3O43395 RPL31P41-201ENST00000477967 372 ntBASIC3.48□□□□□ -1.85
PRPF3O43395 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF3O43395 RPL22P13-201ENST00000493291 347 ntBASIC3.48□□□□□ -1.85
PRPF3O43395 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF3O43395 RNU7-30P-201ENST00000516835 62 ntBASIC3.48□□□□□ -1.85
PRPF3O43395 CKS1BP7-201ENST00000522230 235 ntBASIC3.48□□□□□ -1.85
PRPF3O43395 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.48□□□□□ -1.85
PRPF3O43395 AC009314.1-201ENST00000603871 304 ntBASIC3.48□□□□□ -1.85
PRPF3O43395 AL138726.1-201ENST00000614873 333 ntBASIC3.48□□□□□ -1.85
PRPF3O43395 Y_RNA.804-201ENST00000615262 101 ntBASIC3.48□□□□□ -1.85
PRPF3O43395 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.48□□□□□ -1.85
PRPF3O43395 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF3O43395 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF3O43395 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF3O43395 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF3O43395 Y_RNA.135-201ENST00000363439 95 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF3O43395 SNORA48.8-201ENST00000391324 134 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.47□□□□□ -1.85
PRPF3O43395 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.47□□□□□ -1.85
PRPF3O43395 PDCL2P1-201ENST00000419302 352 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 AC009414.1-201ENST00000427200 443 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 PPP1R2P5-201ENST00000457256 603 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 SNORA59A-201ENST00000459326 152 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 RN7SL283P-201ENST00000489055 303 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 RN7SKP43-201ENST00000516173 320 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 AC109329.1-201ENST00000518744 317 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.47□□□□□ -1.85
PRPF3O43395 AC025423.5-201ENST00000550230 219 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 AC026464.5-201ENST00000562497 722 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 MIR3942-201ENST00000585264 109 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 AC005261.5-201ENST00000596280 355 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 AC005000.2-201ENST00000605468 310 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 FAM157A-202ENST00000615155 405 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 AC010378.1-201ENST00000619270 362 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 AC024581.2-201ENST00000619986 252 ntBASIC3.47□□□□□ -1.85
PRPF3O43395 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
PRPF3O43395 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.46□□□□□ -1.85
PRPF3O43395 AC008264.2-201ENST00000610193 3731 ntBASIC3.46□□□□□ -1.85
PRPF3O43395 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.46□□□□□ -1.86
PRPF3O43395 MIR422A-201ENST00000362286 90 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 RNU6-562P-201ENST00000362731 107 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 RNU6-527P-201ENST00000363425 104 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 SNORD81.2-201ENST00000365153 76 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 SNORD116-20-201ENST00000384529 92 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 MIR1289-1-201ENST00000408836 144 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 AC096664.2-201ENST00000411843 406 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 AC074117.2-201ENST00000417130 397 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 AC093151.1-201ENST00000427711 313 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 U8.21-201ENST00000459536 136 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 RPL27AP5-201ENST00000469428 449 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 RPL7P43-201ENST00000478876 753 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 RN7SL633P-201ENST00000488974 297 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.46□□□□□ -1.86
PRPF3O43395 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 AC096745.1-201ENST00000509945 370 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.46□□□□□ -1.86
PRPF3O43395 RNU6-273P-201ENST00000516937 96 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.46□□□□□ -1.86
PRPF3O43395 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PRPF3O43395 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.46□□□□□ -1.86
PRPF3O43395 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.46□□□□□ -1.86
PRPF3O43395 AC091135.1-201ENST00000585943 307 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 AC008739.2-201ENST00000597006 317 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.46□□□□□ -1.86
PRPF3O43395 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRPF3O43395 AC138915.1-201ENST00000565427 1685 ntBASIC3.46□□□□□ -1.86
PRPF3O43395 AC093831.2-201ENST00000624393 3427 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF3O43395 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF3O43395 Y_RNA.142-201ENST00000363491 102 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 RNU6-105P-201ENST00000363909 104 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 SNORD116-11-201ENST00000383882 92 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.45□□□□□ -1.86
PRPF3O43395 SNRPEP8-201ENST00000442866 260 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 RPL32P28-201ENST00000443577 397 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 AL031274.1-201ENST00000450334 232 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 RN7SL75P-201ENST00000461926 281 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.45□□□□□ -1.86
PRPF3O43395 RNU6-1332P-201ENST00000516666 104 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.45□□□□□ -1.86
PRPF3O43395 AP005597.4-201ENST00000526762 229 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.45□□□□□ -1.86
PRPF3O43395 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.45□□□□□ -1.86
PRPF3O43395 AC011471.1-201ENST00000585766 187 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 AC020895.1-201ENST00000595362 272 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 AC019159.1-201ENST00000605094 187 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 AC123912.5-201ENST00000605470 343 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 AC011890.2-201ENST00000613393 294 ntBASIC3.45□□□□□ -1.86
PRPF3O43395 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF3O43395 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
PRPF3O43395 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRPF3O43395 AC002543.1-201ENST00000299783 1954 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRPF3O43395 AL445529.1-201ENST00000398713 389 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 TRIAP1P1-201ENST00000427062 225 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 AC093019.1-201ENST00000443135 252 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms