Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 U2.21-201ENST00000637295 81 ntBASIC2.24□□□□□ -2.05
CDX4O14627 AC099654.14-201ENST00000638599 341 ntBASIC2.24□□□□□ -2.05
CDX4O14627 AL161431.1-201ENST00000618966 4205 ntBASIC2.24□□□□□ -2.05
CDX4O14627 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDX4O14627 CASC19-280ENST00000642102 1351 ntBASIC2.23□□□□□ -2.05
CDX4O14627 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.23□□□□□ -2.05
CDX4O14627 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDX4O14627 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CDX4O14627 RNU6-778P-201ENST00000363269 103 ntBASIC2.23□□□□□ -2.05
CDX4O14627 Y_RNA.226-201ENST00000364337 114 ntBASIC2.23□□□□□ -2.05
CDX4O14627 RNU6-996P-201ENST00000365438 107 ntBASIC2.23□□□□□ -2.05
CDX4O14627 RNU4-48P-201ENST00000365559 182 ntBASIC2.23□□□□□ -2.05
CDX4O14627 RNU6-395P-201ENST00000365662 106 ntBASIC2.23□□□□□ -2.05
CDX4O14627 SNORA24.1-201ENST00000384401 135 ntBASIC2.23□□□□□ -2.05
CDX4O14627 Y_RNA.534-201ENST00000384599 112 ntBASIC2.23□□□□□ -2.05
CDX4O14627 SNORA41-201ENST00000384675 132 ntBASIC2.23□□□□□ -2.05
CDX4O14627 RNU6-606P-201ENST00000384721 111 ntBASIC2.23□□□□□ -2.05
CDX4O14627 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CDX4O14627 RNA5SP213-201ENST00000391031 106 ntBASIC2.23□□□□□ -2.05
CDX4O14627 SNORA26.9-201ENST00000391322 122 ntBASIC2.23□□□□□ -2.05
CDX4O14627 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDX4O14627 AL023284.1-201ENST00000403956 276 ntBASIC2.23□□□□□ -2.05
CDX4O14627 SNORD88.1-201ENST00000408684 91 ntBASIC2.23□□□□□ -2.05
CDX4O14627 RNA5SP492-201ENST00000411330 114 ntBASIC2.23□□□□□ -2.05
CDX4O14627 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CDX4O14627 AL353729.1-201ENST00000425044 720 ntBASIC2.23□□□□□ -2.05
CDX4O14627 AL358075.3-201ENST00000426289 226 ntBASIC2.23□□□□□ -2.05
CDX4O14627 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.23□□□□□ -2.05
CDX4O14627 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CDX4O14627 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.23□□□□□ -2.05
CDX4O14627 AC098831.1-201ENST00000440661 216 ntBASIC2.23□□□□□ -2.05
CDX4O14627 BRK1P2-201ENST00000442875 223 ntBASIC2.23□□□□□ -2.05
CDX4O14627 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.23□□□□□ -2.05
CDX4O14627 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.23□□□□□ -2.05
CDX4O14627 AL356010.1-201ENST00000456364 102 ntBASIC2.23□□□□□ -2.05
CDX4O14627 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.23□□□□□ -2.05
CDX4O14627 RPL31P41-201ENST00000477967 372 ntBASIC2.23□□□□□ -2.05
CDX4O14627 RPS27AP10-201ENST00000496103 208 ntBASIC2.23□□□□□ -2.05
CDX4O14627 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.23□□□□□ -2.05
CDX4O14627 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.23□□□□□ -2.05
CDX4O14627 AC098799.2-201ENST00000509466 868 ntBASIC2.23□□□□□ -2.05
CDX4O14627 RNU6-358P-201ENST00000516564 75 ntBASIC2.23□□□□□ -2.05
CDX4O14627 RNU6-295P-201ENST00000516901 104 ntBASIC2.23□□□□□ -2.05
CDX4O14627 AC084851.1-201ENST00000529105 249 ntBASIC2.23□□□□□ -2.05
CDX4O14627 OR5B19P-201ENST00000531766 928 ntBASIC2.23□□□□□ -2.05
CDX4O14627 MIR1273C-201ENST00000578669 77 ntBASIC2.23□□□□□ -2.05
CDX4O14627 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
CDX4O14627 AC103810.1-201ENST00000579873 453 ntBASIC2.23□□□□□ -2.05
CDX4O14627 MIR4775-201ENST00000581168 75 ntBASIC2.23□□□□□ -2.05
CDX4O14627 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.23□□□□□ -2.05
CDX4O14627 AL355877.2-201ENST00000603670 358 ntBASIC2.23□□□□□ -2.05
CDX4O14627 AL158032.1-201ENST00000605401 106 ntBASIC2.23□□□□□ -2.05
CDX4O14627 AC008945.2-201ENST00000606056 604 ntBASIC2.23□□□□□ -2.05
CDX4O14627 RMST_3.1-201ENST00000611651 109 ntBASIC2.23□□□□□ -2.05
CDX4O14627 AC024940.5-201ENST00000622889 474 ntBASIC2.23□□□□□ -2.05
CDX4O14627 MIR3199-2-201ENST00000636243 86 ntBASIC2.23□□□□□ -2.05
CDX4O14627 AC024614.3-201ENST00000637860 256 ntBASIC2.23□□□□□ -2.05
CDX4O14627 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CDX4O14627 CKAP2P1-201ENST00000555477 2049 ntBASIC2.23□□□□□ -2.05
CDX4O14627 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CDX4O14627 NACAP2-201ENST00000318548 624 ntBASIC2.22□□□□□ -2.05
CDX4O14627 Y_RNA.33-201ENST00000362591 102 ntBASIC2.22□□□□□ -2.05
CDX4O14627 RNU6-451P-201ENST00000362921 107 ntBASIC2.22□□□□□ -2.05
CDX4O14627 RNY3P3-201ENST00000363816 102 ntBASIC2.22□□□□□ -2.05
CDX4O14627 Y_RNA.255-201ENST00000364581 97 ntBASIC2.22□□□□□ -2.05
CDX4O14627 MIR181B1-201ENST00000385240 110 ntBASIC2.22□□□□□ -2.05
CDX4O14627 MT-TL1-201ENST00000386347 75 ntBASIC2.22□□□□□ -2.05
CDX4O14627 MIR454-201ENST00000390180 115 ntBASIC2.22□□□□□ -2.05
CDX4O14627 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CDX4O14627 RNU6-876P-201ENST00000391295 104 ntBASIC2.22□□□□□ -2.05
CDX4O14627 OR9R1P-201ENST00000412200 877 ntBASIC2.22□□□□□ -2.05
CDX4O14627 AC096649.2-201ENST00000416186 393 ntBASIC2.22□□□□□ -2.05
CDX4O14627 BPY2DP-201ENST00000422208 265 ntBASIC2.22□□□□□ -2.05
CDX4O14627 AC098614.2-201ENST00000426040 255 ntBASIC2.22□□□□□ -2.05
CDX4O14627 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.22□□□□□ -2.05
CDX4O14627 SEPT14P3-201ENST00000439401 183 ntBASIC2.22□□□□□ -2.05
CDX4O14627 RPL39P40-201ENST00000445481 146 ntBASIC2.22□□□□□ -2.05
CDX4O14627 AL732372.2-207ENST00000445840 183 ntBASIC2.22□□□□□ -2.05
CDX4O14627 RPS15AP27-201ENST00000449183 343 ntBASIC2.22□□□□□ -2.05
CDX4O14627 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.22□□□□□ -2.05
CDX4O14627 SEPT14P2-201ENST00000453405 183 ntBASIC2.22□□□□□ -2.05
CDX4O14627 AL162395.1-201ENST00000457882 422 ntBASIC2.22□□□□□ -2.05
CDX4O14627 RNU6-261P-201ENST00000459506 102 ntBASIC2.22□□□□□ -2.05
CDX4O14627 AL163973.1-201ENST00000484753 577 ntBASIC2.22□□□□□ -2.05
CDX4O14627 SUMO2P6-201ENST00000505273 288 ntBASIC2.22□□□□□ -2.05
CDX4O14627 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.22□□□□□ -2.05
CDX4O14627 MRPS36P2-201ENST00000512569 299 ntBASIC2.22□□□□□ -2.05
CDX4O14627 SEPT14P4-201ENST00000513445 186 ntBASIC2.22□□□□□ -2.05
CDX4O14627 RNU6-703P-201ENST00000516946 107 ntBASIC2.22□□□□□ -2.05
CDX4O14627 RN7SKP40-201ENST00000517211 242 ntBASIC2.22□□□□□ -2.05
CDX4O14627 FO082796.1-201ENST00000523795 183 ntBASIC2.22□□□□□ -2.05
CDX4O14627 OR5BN1P-201ENST00000532955 829 ntBASIC2.22□□□□□ -2.05
CDX4O14627 AL121579.1-201ENST00000555129 305 ntBASIC2.22□□□□□ -2.05
CDX4O14627 AL157871.3-201ENST00000557231 293 ntBASIC2.22□□□□□ -2.05
CDX4O14627 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.22□□□□□ -2.05
CDX4O14627 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.22□□□□□ -2.05
CDX4O14627 BNIP3P30-201ENST00000601184 574 ntBASIC2.22□□□□□ -2.05
CDX4O14627 MIR15A-201ENST00000607334 83 ntBASIC2.22□□□□□ -2.05
CDX4O14627 AC067747.1-201ENST00000608026 250 ntBASIC2.22□□□□□ -2.05
CDX4O14627 uc_338.11-201ENST00000619132 160 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms