Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC092648.1-201ENST00000425870 423 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 USP9YP18-201ENST00000425912 695 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.93□□□□□ -2.26
SDCBPO00560 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.93□□□□□ -2.26
SDCBPO00560 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.93□□□□□ -2.26
SDCBPO00560 RPS6P15-201ENST00000431996 751 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 AC104058.1-201ENST00000448028 297 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SDCBPO00560 RNU6-953P-201ENST00000459154 107 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.93□□□□□ -2.26
SDCBPO00560 RPL30P6-201ENST00000475925 342 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 AC119751.4-201ENST00000507498 357 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 AC093259.1-201ENST00000509755 300 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.93□□□□□ -2.26
SDCBPO00560 RNU6-276P-201ENST00000516114 96 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 AC091163.3-201ENST00000518269 1144 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.93□□□□□ -2.26
SDCBPO00560 AC092451.2-201ENST00000538746 658 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 AC018630.3-201ENST00000542637 96 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.93□□□□□ -2.26
SDCBPO00560 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.93□□□□□ -2.26
SDCBPO00560 AC009712.1-201ENST00000564938 316 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 AP000942.3-201ENST00000603702 160 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 CYP2C61P-201ENST00000604072 290 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 PART1_2.1-201ENST00000612397 250 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 MIR8074-201ENST00000615081 81 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
SDCBPO00560 AC093648.1-201ENST00000623546 606 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 AL356596.1-201ENST00000624230 379 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 AC022513.1-201ENST00000624512 117 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.93□□□□□ -2.26
SDCBPO00560 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
SDCBPO00560 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SDCBPO00560 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SDCBPO00560 HAUS6P2-201ENST00000433254 2404 ntBASIC0.93□□□□□ -2.26
SDCBPO00560 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.92□□□□□ -2.26
SDCBPO00560 snoU2_19.1-201ENST00000362361 80 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 RNU6-511P-201ENST00000363496 107 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 RNU6-271P-201ENST00000363858 105 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 RNU6-487P-201ENST00000365430 104 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 RNU6-72P-201ENST00000384285 79 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 CBX3P9-201ENST00000402326 552 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 MIR1305-201ENST00000408300 86 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.92□□□□□ -2.26
SDCBPO00560 AL669831.1-202ENST00000428504 417 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 CALM1P1-201ENST00000442082 433 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 AL022238.1-201ENST00000442557 355 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 AC093899.1-201ENST00000457984 376 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 HMGB1P30-201ENST00000492455 606 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.92□□□□□ -2.26
SDCBPO00560 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.92□□□□□ -2.26
SDCBPO00560 RNU6-991P-201ENST00000516168 107 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.92□□□□□ -2.26
SDCBPO00560 AC013828.2-201ENST00000532487 235 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.92□□□□□ -2.26
SDCBPO00560 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.92□□□□□ -2.26
SDCBPO00560 MIR3169-201ENST00000578032 83 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 MIR4422-201ENST00000581938 83 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.92□□□□□ -2.26
SDCBPO00560 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 MIR3529-201ENST00000637713 78 ntBASIC0.92□□□□□ -2.26
SDCBPO00560 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.92□□□□□ -2.26
SDCBPO00560 RNU6-1210P-201ENST00000363775 107 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 SNORA62.1-201ENST00000364287 154 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 SNORD114-6-201ENST00000364393 72 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 RNY3P13-201ENST00000365542 102 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 RNU6-946P-201ENST00000383878 107 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 RNU6-723P-201ENST00000383973 107 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 RNU6-1257P-201ENST00000384625 110 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 RNU2-23P-201ENST00000410545 195 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 Y_RNA.623-201ENST00000411128 95 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.91□□□□□ -2.26
SDCBPO00560 MTND2P4-201ENST00000445034 1004 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.91□□□□□ -2.26
SDCBPO00560 SNRPFP4-201ENST00000456366 242 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 snoU13.14-201ENST00000459372 104 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 MTCYBP40-201ENST00000509390 1135 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 AC010587.2-201ENST00000511727 448 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 RN7SKP256-201ENST00000517201 314 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 CR383656.8-201ENST00000549046 145 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.91□□□□□ -2.26
SDCBPO00560 MIR4295-201ENST00000585286 85 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 AC112220.3-201ENST00000605502 502 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 AC091965.4-201ENST00000607691 587 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 AC063943.3-201ENST00000615562 356 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 AC092140.2-201ENST00000618027 521 ntBASIC0.91□□□□□ -2.26
SDCBPO00560 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.91□□□□□ -2.26
SDCBPO00560 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SDCBPO00560 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.91□□□□□ -2.26
SDCBPO00560 AC092104.1-201ENST00000497346 1441 ntBASIC0.9□□□□□ -2.26
SDCBPO00560 RNA5SP493-201ENST00000364115 91 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 RNU5E-6P-201ENST00000365574 115 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 RNU6-395P-201ENST00000365662 106 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 SNORD116-20-201ENST00000384529 92 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 RNU6-939P-201ENST00000384634 107 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 AC009518.2-201ENST00000418056 731 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.9□□□□□ -2.27
SDCBPO00560 TOMM22P2-201ENST00000430735 237 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.9□□□□□ -2.27
SDCBPO00560 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms