Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 SNORD50.2-201ENST00000365465 70 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 RNU6-918P-201ENST00000391219 106 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 RNU6-712P-201ENST00000410558 100 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 RNU2-51P-201ENST00000410708 197 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 AL117339.3-201ENST00000418733 162 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 Z82188.1-201ENST00000436709 154 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 RPS29P27-201ENST00000463711 170 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 TOMM22P6-201ENST00000465035 409 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 RN7SL504P-201ENST00000494496 287 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 SEPT14P8-201ENST00000508026 178 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.91□□□□□ -1.78
RFXAPO00287 Y_RNA.662-201ENST00000516028 97 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 AC004944.1-201ENST00000517807 3059 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 AC109479.2-201ENST00000517842 174 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 AC025755.1-201ENST00000521306 278 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.91□□□□□ -1.78
RFXAPO00287 AC008011.1-201ENST00000545989 227 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 LARP7P3-201ENST00000579888 337 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 MIR4659A-201ENST00000580269 81 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 AL451007.1-201ENST00000595491 289 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 AC072026.1-201ENST00000605023 201 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 AC116447.1-201ENST00000613153 453 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.91□□□□□ -1.78
RFXAPO00287 AL360181.4-201ENST00000621752 134 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 AC090617.7-201ENST00000623952 126 ntBASIC3.91□□□□□ -1.78
RFXAPO00287 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
RFXAPO00287 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
RFXAPO00287 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFXAPO00287 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RFXAPO00287 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
RFXAPO00287 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RFXAPO00287 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RFXAPO00287 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.9□□□□□ -1.79
RFXAPO00287 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.9□□□□□ -1.79
RFXAPO00287 UBE2L2-201ENST00000254302 429 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 RNU6-428P-201ENST00000362942 107 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 RNU6-926P-201ENST00000384075 107 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 RNU4-30P-201ENST00000410245 143 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 RNU6-394P-201ENST00000410735 107 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 AL096701.2-201ENST00000416920 238 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 HMGB1P27-201ENST00000431429 603 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 USP9YP7-201ENST00000436723 430 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 RPL26P6-201ENST00000440913 438 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.9□□□□□ -1.79
RFXAPO00287 USP9YP32-201ENST00000452432 430 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 RPL23AP45-201ENST00000476406 468 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 MRPL42P6-201ENST00000486397 371 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 PHBP14-201ENST00000512887 367 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.9□□□□□ -1.79
RFXAPO00287 APOOP4-201ENST00000513530 597 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 RNU6-1315P-201ENST00000517187 99 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 Y_RNA.772-201ENST00000606692 102 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.9□□□□□ -1.79
RFXAPO00287 AC243829.7-201ENST00000633081 225 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 AL773545.4-201ENST00000637262 310 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 AL513478.4-201ENST00000641636 310 ntBASIC3.9□□□□□ -1.79
RFXAPO00287 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.9□□□□□ -1.79
RFXAPO00287 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.9□□□□□ -1.79
RFXAPO00287 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.9□□□□□ -1.79
RFXAPO00287 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFXAPO00287 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFXAPO00287 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFXAPO00287 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
RFXAPO00287 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
RFXAPO00287 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFXAPO00287 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFXAPO00287 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RFXAPO00287 AC093535.2-201ENST00000624769 2326 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
RFXAPO00287 AC010329.2-201ENST00000595195 2737 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 RNA5SP502-201ENST00000362694 119 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 Y_RNA.233-201ENST00000364407 101 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 RNU6-1027P-201ENST00000383998 107 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 RNU6-1135P-201ENST00000411083 103 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 RNA5SP39-201ENST00000411245 120 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.89□□□□□ -1.79
RFXAPO00287 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.89□□□□□ -1.79
RFXAPO00287 AC087477.1-201ENST00000465747 340 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.89□□□□□ -1.79
RFXAPO00287 RNU6-1219P-201ENST00000516143 112 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 RNU6-612P-201ENST00000516909 102 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 AP006245.1-201ENST00000522549 120 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 MRPS18CP4-201ENST00000535821 231 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.89□□□□□ -1.79
RFXAPO00287 AL157871.3-201ENST00000557231 293 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFXAPO00287 AP001485.1-201ENST00000604799 199 ntBASIC3.89□□□□□ -1.79
RFXAPO00287 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.89□□□□□ -1.79
RFXAPO00287 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFXAPO00287 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFXAPO00287 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
RFXAPO00287 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFXAPO00287 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFXAPO00287 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFXAPO00287 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RFXAPO00287 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFXAPO00287 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFXAPO00287 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFXAPO00287 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFXAPO00287 AC135776.4-201ENST00000624300 1904 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms