Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AL606489.2-201ENST00000433886 234 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 DNAJC19P4-201ENST00000440115 345 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 CALM1P1-201ENST00000442082 433 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC079781.2-201ENST00000446424 169 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AP001324.2-201ENST00000461163 319 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC023194.1-201ENST00000493084 308 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC116655.1-201ENST00000508324 901 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC105313.1-201ENST00000509121 353 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC113155.1-201ENST00000511141 769 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 MTND3P5-201ENST00000512798 333 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-1178P-201ENST00000516674 107 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RN7SKP219-201ENST00000516825 296 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-295P-201ENST00000516901 104 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RN7SKP40-201ENST00000517211 242 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 COX6CP5-201ENST00000527162 228 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC024909.2-201ENST00000553035 286 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 MIR4782-201ENST00000577987 79 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 MIR5694-201ENST00000581190 76 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 MIR548AC-201ENST00000585049 88 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AL391813.1-201ENST00000603098 260 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AL121917.1-203ENST00000605534 577 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC008536.2-201ENST00000607284 349 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AF250324.2-201ENST00000608299 610 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC092954.2-201ENST00000609103 430 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AC109347.2-201ENST00000610220 349 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 U2.15-201ENST00000611544 191 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 U2.16-201ENST00000613119 191 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 U2.12-201ENST00000613778 191 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 U2.20-201ENST00000613956 192 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 U2.9-201ENST00000615427 191 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 U2.11-201ENST00000616345 191 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 U2.2-201ENST00000616535 191 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 U2.3-201ENST00000617785 191 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 U2.19-201ENST00000618602 191 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 RNU2-1-201ENST00000618664 191 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 U2.6-201ENST00000619225 191 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 U2.5-201ENST00000619465 191 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 U2.10-201ENST00000620268 191 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 AL354685.2-201ENST00000448218 1447 ntBASIC1.63□□□□□ -2.15
TRAV40A0A0B4J280 MTND5P17-201ENST00000418405 1603 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 Y_RNA.1-201ENST00000352915 104 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-942P-201ENST00000363002 107 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-1097P-201ENST00000363586 107 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 SNORA67.1-201ENST00000364749 141 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 Y_RNA.296-201ENST00000364930 108 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-395P-201ENST00000365662 106 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-1103P-201ENST00000384150 107 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 Y_RNA.517-201ENST00000384551 106 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 MIR218-1-201ENST00000384999 110 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 SNORA16.2-201ENST00000390991 127 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNU2-3P-201ENST00000410144 191 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNU4-55P-201ENST00000410731 137 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AL358075.3-201ENST00000426289 226 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AC027124.2-201ENST00000428249 105 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 SRIP2-201ENST00000428470 166 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AC073464.1-201ENST00000429823 534 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AC002486.1-201ENST00000435098 391 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNU7-182P-201ENST00000459009 62 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-717P-201ENST00000459076 104 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AC079804.2-201ENST00000490376 200 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 CCDC34P1-201ENST00000507441 517 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-237P-201ENST00000515985 71 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-1038P-201ENST00000516516 104 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 Y_RNA.687-201ENST00000516558 91 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNU1-40P-201ENST00000516816 164 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNU1-97P-201ENST00000516872 164 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNA5SP503-201ENST00000517047 117 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 ACA59.2-201ENST00000517061 156 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 RNU1-104P-201ENST00000517280 175 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 BNIP3P6-201ENST00000549284 499 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 LINC00933-203ENST00000559812 219 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AC005498.1-201ENST00000592125 465 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 BNIP3P30-201ENST00000601184 574 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AC078795.2-201ENST00000602835 1252 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 NDUFA8P1-201ENST00000605525 367 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 AL158209.2-201ENST00000619266 216 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 MIR6863-201ENST00000636112 90 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms