Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 BX119904.4-201ENST00000424402 301 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 AC244023.1-201ENST00000426884 112 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 COX7BP2-201ENST00000437976 242 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 MTCO3P45-201ENST00000443036 613 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 AC108059.3-201ENST00000456388 214 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 RPL37P6-201ENST00000460682 294 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 HMGN1P7-201ENST00000491722 313 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 AC097473.1-201ENST00000508142 408 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU6-165P-201ENST00000517170 99 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 HSPE1P4-201ENST00000550617 308 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 AC012414.2-201ENST00000559474 187 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 AC242498.1-201ENST00000604134 111 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 AC107304.1-201ENST00000604229 296 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 BNIP3P31-201ENST00000604515 566 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 AC243994.1-201ENST00000618627 109 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 AC123767.1-202ENST00000620407 817 ntBASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.26□□□□□ -2.37
TRAV13-2A0A0B4J235 LINC02555-201ENST00000563933 1951 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 MIR373-201ENST00000362273 69 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 RNA5SP347-201ENST00000362445 119 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU6-288P-201ENST00000363690 104 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 SNORD51.1-201ENST00000365405 77 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 MIR200A-201ENST00000384875 90 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 MIR29B2-201ENST00000385055 81 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC063976.4-201ENST00000421971 163 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC002429.1-201ENST00000437672 148 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 BTF3P15-201ENST00000455606 336 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU6-333P-201ENST00000459117 107 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AF131216.2-201ENST00000512316 564 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU6-390P-201ENST00000516259 103 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 RN7SKP49-201ENST00000516675 260 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 RNA5SP481-201ENST00000516814 122 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 DEFB108E-201ENST00000524692 240 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC087897.1-201ENST00000550134 156 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC025423.5-201ENST00000550230 219 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC137800.2-201ENST00000574375 120 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC136618.2-201ENST00000575091 400 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 DPPA3P3-201ENST00000603842 430 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC016727.1-205ENST00000605437 569 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AL359821.1-201ENST00000605519 182 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AP001596.2-201ENST00000608410 312 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AC106858.1-201ENST00000637497 429 ntBASIC0.25□□□□□ -2.37
TRAV13-2A0A0B4J235 AL391994.1-201ENST00000254724 282 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU2-7P-201ENST00000410794 178 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 TPMTP2-201ENST00000414372 726 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 MTND4P6-201ENST00000438297 472 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 AC018659.1-201ENST00000551083 169 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 AL121579.1-201ENST00000555129 305 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 VN1R83P-201ENST00000595685 445 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 AP001981.2-201ENST00000603241 418 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 MIR1264-201ENST00000616374 69 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 RMST_4.1-201ENST00000616886 107 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 MIR5087-201ENST00000635826 76 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 MIR1322-201ENST00000638013 71 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 AC068700.1-201ENST00000565862 3754 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 ELL2P3-201ENST00000457883 1602 ntBASIC0.24□□□□□ -2.37
TRAV13-2A0A0B4J235 AC023934.1-201ENST00000574529 2389 ntBASIC0.23□□□□□ -2.37
TRAV13-2A0A0B4J235 SNRPEP3-201ENST00000338402 276 ntBASIC0.23□□□□□ -2.37
TRAV13-2A0A0B4J235 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU6-1210P-201ENST00000363775 107 ntBASIC0.23□□□□□ -2.37
TRAV13-2A0A0B4J235 RNU4-12P-201ENST00000365233 139 ntBASIC0.23□□□□□ -2.37
TRAV13-2A0A0B4J235 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
TRAV13-2A0A0B4J235 SNORD12-201ENST00000391002 90 ntBASIC0.23□□□□□ -2.37
TRAV13-2A0A0B4J235 AL592045.1-201ENST00000429867 352 ntBASIC0.23□□□□□ -2.37
TRAV13-2A0A0B4J235 MTCYBP15-201ENST00000433123 1127 ntBASIC0.23□□□□□ -2.37
TRAV13-2A0A0B4J235 AC092427.1-201ENST00000439177 601 ntBASIC0.23□□□□□ -2.37
TRAV13-2A0A0B4J235 AL358794.1-201ENST00000445689 381 ntBASIC0.23□□□□□ -2.37
TRAV13-2A0A0B4J235 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV13-2A0A0B4J235 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms