Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 MIR4703-201ENST00000577728 79 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 AC008945.2-201ENST00000606056 604 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 AC103591.3-201ENST00000608684 209 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 AC007684.1-201ENST00000609671 477 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 AC104073.3-201ENST00000610942 955 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 AP003400.5-201ENST00000624827 617 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 MTND5P26-201ENST00000426018 1752 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 HAUS6P2-201ENST00000433254 2404 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 ZNF271P-202ENST00000465539 1970 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 RNA5SP289-201ENST00000362332 137 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 SNORD14B-201ENST00000364533 90 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU6-259P-201ENST00000383999 107 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 MIR181A2-201ENST00000384863 110 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AC016831.2-201ENST00000417179 352 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AL139415.2-201ENST00000431968 163 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AL451074.3-201ENST00000437709 472 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AC016691.1-201ENST00000441321 413 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AC011816.1-201ENST00000441346 546 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 IFNA11P-201ENST00000446352 526 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 MTND1P18-201ENST00000448191 573 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AL353705.4-201ENST00000449661 238 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AL118520.1-201ENST00000450770 291 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AC092436.1-201ENST00000506450 503 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 MTND2P33-201ENST00000506452 1031 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AC104136.1-201ENST00000512969 394 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AC009127.3-201ENST00000570531 403 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AC103987.3-201ENST00000582071 292 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 MIR4635-201ENST00000583759 79 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AC008536.2-201ENST00000607284 349 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AC010378.1-201ENST00000619270 362 ntBASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
PCDHGA1Q9Y5H4 AL139276.1-201ENST00000311910 1001 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 Y_RNA.1-201ENST00000352915 104 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU6-384P-201ENST00000364900 104 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 Y_RNA.436-201ENST00000384097 102 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 Y_RNA.559-201ENST00000384686 107 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 MIR518C-201ENST00000384822 101 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU4-46P-201ENST00000410818 138 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 CYCSP48-201ENST00000417124 323 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 RN7SL297P-201ENST00000483161 293 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 HMGB1P30-201ENST00000492455 606 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 CKS1BP2-201ENST00000497342 240 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 AC109329.1-201ENST00000518744 317 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 PSMA3P-201ENST00000555485 635 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 AC025678.1-201ENST00000567861 338 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 DEFB122-202ENST00000569013 197 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 RPS15AP11-201ENST00000594193 385 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 AC017083.3-201ENST00000609955 700 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.46□□□□□ -2.02
PCDHGA1Q9Y5H4 AC006020.1-201ENST00000420179 1854 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 MIR10A-201ENST00000385043 110 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 CIR1P3-201ENST00000405137 479 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU2-29P-201ENST00000410423 189 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 RN7SKP223-201ENST00000410582 62 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 AF274854.1-201ENST00000413236 615 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 HIGD1AP2-201ENST00000446367 280 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU1-86P-201ENST00000516108 154 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 RNU1-107P-201ENST00000516617 154 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 RN7SKP219-201ENST00000516825 296 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 AP004607.1-201ENST00000524456 203 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 AP005435.4-201ENST00000529514 284 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 AC004486.1-201ENST00000546846 233 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 MTCYBP33-201ENST00000575007 1130 ntBASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.45□□□□□ -2.02
PCDHGA1Q9Y5H4 AC008752.3-201ENST00000588113 712 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms