Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AC010733.2-201ENST00000589496 5702 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NOD1Q9Y239 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.74□□□□□ -1.65
NOD1Q9Y239 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NOD1Q9Y239 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.74□□□□□ -1.65
NOD1Q9Y239 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NOD1Q9Y239 UBE2WP1-201ENST00000362030 340 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 SNORA31-201ENST00000362607 130 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 RNU1-83P-201ENST00000363426 164 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 Y_RNA.170-201ENST00000363746 110 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 SNORD115-8-201ENST00000363856 82 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 SNORD115-38-201ENST00000365037 82 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 Y_RNA.331-201ENST00000365267 102 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 RNU6-1289P-201ENST00000384431 106 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 SNORA46.1-201ENST00000391069 153 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 RNA5SP129-201ENST00000410276 118 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 RN7SKP51-201ENST00000410781 304 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 CYCSP19-201ENST00000411715 316 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.74□□□□□ -1.65
NOD1Q9Y239 RPL23AP46-201ENST00000438548 490 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 RPS29P7-201ENST00000439662 171 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.74□□□□□ -1.65
NOD1Q9Y239 TMSB4XP3-201ENST00000445144 114 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 MRPS10P1-201ENST00000448483 130 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 RPL23AP3-201ENST00000453844 468 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 snoU13.6-201ENST00000458785 104 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 AC146944.2-203ENST00000502493 354 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 AC139495.1-202ENST00000513164 354 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 SNORA67.7-201ENST00000516664 135 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 RNA5SP468-201ENST00000516782 93 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.74□□□□□ -1.65
NOD1Q9Y239 AP004242.1-201ENST00000533701 349 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 MIR3158-1-201ENST00000583596 81 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 AC005176.2-201ENST00000596933 147 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 AL590240.4-201ENST00000616908 390 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NOD1Q9Y239 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NOD1Q9Y239 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NOD1Q9Y239 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.74□□□□□ -1.65
NOD1Q9Y239 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NOD1Q9Y239 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.74□□□□□ -1.65
NOD1Q9Y239 AL672167.1-204ENST00000641875 3017 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.74□□□□□ -1.65
NOD1Q9Y239 FAM35BP-202ENST00000497389 3337 ntBASIC4.74□□□□□ -1.65
NOD1Q9Y239 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.74□□□□□ -1.65
NOD1Q9Y239 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NOD1Q9Y239 AL672167.1-203ENST00000641299 2975 ntBASIC4.73□□□□□ -1.65
NOD1Q9Y239 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NOD1Q9Y239 DHX9P1-201ENST00000436565 3076 ntBASIC4.73□□□□□ -1.65
NOD1Q9Y239 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NOD1Q9Y239 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NOD1Q9Y239 Y_RNA.136-201ENST00000363444 102 ntBASIC4.73□□□□□ -1.65
NOD1Q9Y239 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NOD1Q9Y239 Y_RNA.383-201ENST00000383855 97 ntBASIC4.73□□□□□ -1.65
NOD1Q9Y239 RPL19P1-201ENST00000411635 428 ntBASIC4.73□□□□□ -1.65
NOD1Q9Y239 Z74021.1-201ENST00000423610 407 ntBASIC4.73□□□□□ -1.65
NOD1Q9Y239 RNU6-581P-201ENST00000516214 105 ntBASIC4.73□□□□□ -1.65
NOD1Q9Y239 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.73□□□□□ -1.65
NOD1Q9Y239 AC021231.3-201ENST00000558497 370 ntBASIC4.73□□□□□ -1.65
NOD1Q9Y239 AC009163.5-201ENST00000575421 637 ntBASIC4.73□□□□□ -1.65
NOD1Q9Y239 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.73□□□□□ -1.65
NOD1Q9Y239 MZT1P2-201ENST00000604387 248 ntBASIC4.73□□□□□ -1.65
NOD1Q9Y239 AL160290.3-201ENST00000604869 165 ntBASIC4.73□□□□□ -1.65
NOD1Q9Y239 AL359198.2-201ENST00000611836 194 ntBASIC4.73□□□□□ -1.65
NOD1Q9Y239 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NOD1Q9Y239 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NOD1Q9Y239 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NOD1Q9Y239 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.73□□□□□ -1.65
NOD1Q9Y239 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.73□□□□□ -1.65
NOD1Q9Y239 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NOD1Q9Y239 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NOD1Q9Y239 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NOD1Q9Y239 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 RPL23AP36-201ENST00000413895 458 ntBASIC4.72□□□□□ -1.65
NOD1Q9Y239 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 AC078809.1-201ENST00000427601 140 ntBASIC4.72□□□□□ -1.65
NOD1Q9Y239 AC010095.1-201ENST00000443543 144 ntBASIC4.72□□□□□ -1.65
NOD1Q9Y239 AC012308.1-201ENST00000451232 178 ntBASIC4.72□□□□□ -1.65
NOD1Q9Y239 RPS29P20-201ENST00000489592 171 ntBASIC4.72□□□□□ -1.65
NOD1Q9Y239 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.72□□□□□ -1.65
NOD1Q9Y239 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 AC007546.2-201ENST00000623996 360 ntBASIC4.72□□□□□ -1.65
NOD1Q9Y239 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NOD1Q9Y239 U6.106-201ENST00000636360 105 ntBASIC4.72□□□□□ -1.65
NOD1Q9Y239 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NOD1Q9Y239 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NOD1Q9Y239 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.72□□□□□ -1.65
NOD1Q9Y239 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms