Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC116655.1-201ENST00000508324 901 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.23□□□□□ -2.05
SMC3Q9UQE7 AC079598.5-201ENST00000547460 117 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.23□□□□□ -2.05
SMC3Q9UQE7 ANP32BP3-201ENST00000559213 706 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 AC137800.2-201ENST00000574375 120 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 AC012213.3-201ENST00000577199 777 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.23□□□□□ -2.05
SMC3Q9UQE7 AC064872.1-201ENST00000604823 1072 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 AL158032.1-201ENST00000605401 106 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 AL451064.1-201ENST00000607718 471 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 AL359547.2-201ENST00000615810 418 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 AL590808.1-201ENST00000618696 141 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 MIR5739-201ENST00000619803 80 ntBASIC2.23□□□□□ -2.05
SMC3Q9UQE7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SMC3Q9UQE7 FGF7P2-201ENST00000332473 296 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 SNORD3E-201ENST00000362899 217 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 RNU4-75P-201ENST00000364621 146 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 RNU6-169P-201ENST00000365336 107 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 RNU6-898P-201ENST00000365627 104 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 MIR95-201ENST00000385072 81 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AC068050.1-201ENST00000394891 380 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 RPL23AP32-201ENST00000395315 459 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 RNA5SP425-201ENST00000410336 112 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 RN7SKP223-201ENST00000410582 62 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 RN7SKP192-201ENST00000411291 327 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 RNA5SP508-201ENST00000411327 119 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AC016907.1-201ENST00000419483 435 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AC009961.2-201ENST00000435771 251 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 MTND4P32-201ENST00000437189 1237 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.22□□□□□ -2.05
SMC3Q9UQE7 DNAJC19P4-201ENST00000440115 345 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AC079448.1-201ENST00000449377 373 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AL353705.4-201ENST00000449661 238 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.22□□□□□ -2.05
SMC3Q9UQE7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AC023194.1-201ENST00000493084 308 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AC093534.1-201ENST00000504977 132 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.22□□□□□ -2.05
SMC3Q9UQE7 ACA59.2-201ENST00000517061 156 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AP002453.2-201ENST00000533503 320 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.22□□□□□ -2.05
SMC3Q9UQE7 MTND1P15-201ENST00000579262 949 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AL590229.1-201ENST00000603497 542 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AC090578.1-201ENST00000604955 591 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 AC136475.10-201ENST00000620253 385 ntBASIC2.22□□□□□ -2.05
SMC3Q9UQE7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SMC3Q9UQE7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
SMC3Q9UQE7 RNY1P12-201ENST00000364251 105 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 RNA5SP240-201ENST00000365355 128 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 SNORA20.2-201ENST00000383922 131 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 SNORA24.1-201ENST00000384401 135 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 RNY3P9-201ENST00000384727 106 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 MIR1-2-201ENST00000384961 85 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC3Q9UQE7 EDDM3CP-201ENST00000415977 425 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 RPL31P63-201ENST00000422565 375 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 DPH3P2-201ENST00000422618 250 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AC000111.3-201ENST00000433478 193 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 MTATP6P16-201ENST00000434543 526 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.21□□□□□ -2.06
SMC3Q9UQE7 RPS24P1-201ENST00000438550 371 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AC244505.5-201ENST00000443639 207 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 RPL7P12-201ENST00000446719 750 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AC098826.2-201ENST00000452011 651 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC3Q9UQE7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC3Q9UQE7 RPL23AP42-201ENST00000471152 471 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AC010424.1-201ENST00000506336 297 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.21□□□□□ -2.06
SMC3Q9UQE7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.21□□□□□ -2.06
SMC3Q9UQE7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 AC024940.5-201ENST00000622889 474 ntBASIC2.21□□□□□ -2.06
SMC3Q9UQE7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SMC3Q9UQE7 ZNF702P-202ENST00000434269 1966 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 RNU6-166P-201ENST00000384371 107 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 DEFB108C-201ENST00000400154 252 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 SNORA3.2-201ENST00000408221 125 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.2□□□□□ -2.06
SMC3Q9UQE7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.2□□□□□ -2.06
SMC3Q9UQE7 MTCO2P34-201ENST00000421994 607 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.2□□□□□ -2.06
SMC3Q9UQE7 AL589823.1-201ENST00000429577 183 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 AL139415.2-201ENST00000431968 163 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 RPL23AP3-201ENST00000453844 468 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 snoU109.1-201ENST00000459339 135 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 RNU6-123P-201ENST00000516163 102 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms