Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SNORA44.1-201ENST00000517031 108 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 RNU6-201P-201ENST00000517100 61 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AC105185.1-201ENST00000518705 535 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AC011979.2-201ENST00000527568 352 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AP003122.4-201ENST00000530980 758 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AC112187.2-201ENST00000604345 283 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AC013244.3-201ENST00000605614 388 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 U6.42-201ENST00000618440 107 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AL049777.1-201ENST00000622740 518 ntBASIC1.39□□□□□ -2.19
VAPAQ9P0L0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.39□□□□□ -2.19
VAPAQ9P0L0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
VAPAQ9P0L0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
VAPAQ9P0L0 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 RNA5SP390-201ENST00000410191 113 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AL365400.1-201ENST00000431854 640 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.38□□□□□ -2.19
VAPAQ9P0L0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.38□□□□□ -2.19
VAPAQ9P0L0 snoU13.14-201ENST00000459372 104 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 RPL30P12-201ENST00000474666 353 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 RPL30P6-201ENST00000475925 342 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AC093259.1-201ENST00000509755 300 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AC018630.3-201ENST00000542637 96 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 MIR3683-201ENST00000580847 82 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 WISP1-OT1-201ENST00000602893 642 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AL138889.2-201ENST00000603883 242 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 RNU4-5P-201ENST00000607255 135 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AL139418.1-201ENST00000613613 177 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AC063943.3-201ENST00000615562 356 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AL359547.2-201ENST00000615810 418 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AC091304.6-201ENST00000619761 202 ntBASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.38□□□□□ -2.19
VAPAQ9P0L0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.38□□□□□ -2.19
VAPAQ9P0L0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
VAPAQ9P0L0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
VAPAQ9P0L0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VAPAQ9P0L0 MIR517C-201ENST00000385103 95 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
VAPAQ9P0L0 Y_RNA.597-201ENST00000410463 100 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 AC007098.1-201ENST00000420122 367 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 VN1R108P-201ENST00000431580 830 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 RPL22P17-201ENST00000438729 315 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 HMGB1P18-201ENST00000438801 619 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 NDUFB1P2-201ENST00000449477 176 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.37□□□□□ -2.19
VAPAQ9P0L0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.37□□□□□ -2.19
VAPAQ9P0L0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.37□□□□□ -2.19
VAPAQ9P0L0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.37□□□□□ -2.19
VAPAQ9P0L0 RNU6-991P-201ENST00000516168 107 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 RNVU1-2-201ENST00000516326 135 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 RNU7-51P-201ENST00000516560 62 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 AC022616.6-201ENST00000520479 119 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.37□□□□□ -2.19
VAPAQ9P0L0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.37□□□□□ -2.19
VAPAQ9P0L0 AC011494.1-201ENST00000596454 237 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 AL139022.2-201ENST00000606934 443 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.37□□□□□ -2.19
VAPAQ9P0L0 AC007792.1-201ENST00000623023 402 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 SCARNA4-202ENST00000625402 129 ntBASIC1.37□□□□□ -2.19
VAPAQ9P0L0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.37□□□□□ -2.19
VAPAQ9P0L0 OR4G2P-201ENST00000328113 903 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 SNORD56.1-201ENST00000362913 68 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 RNU6-931P-201ENST00000363850 107 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 Y_RNA.302-201ENST00000364997 102 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 RNU6-338P-201ENST00000383888 105 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 RNU6-809P-201ENST00000384461 107 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 RNU6-1179P-201ENST00000384667 107 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 RPS3AP36-201ENST00000398190 775 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.36□□□□□ -2.19
VAPAQ9P0L0 MTCO2P21-201ENST00000419780 677 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.36□□□□□ -2.19
VAPAQ9P0L0 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.36□□□□□ -2.19
VAPAQ9P0L0 AL354695.1-201ENST00000427935 228 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 MTND1P20-201ENST00000430341 950 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.36□□□□□ -2.19
VAPAQ9P0L0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.36□□□□□ -2.19
VAPAQ9P0L0 HSPE1P24-201ENST00000450782 238 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 MTATP6P14-201ENST00000455189 673 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 MTCYBP40-201ENST00000509390 1135 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 TPT1P8-201ENST00000510120 555 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 SNORA43.2-201ENST00000516652 128 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 BNIP3P6-201ENST00000549284 499 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.36□□□□□ -2.19
VAPAQ9P0L0 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.36□□□□□ -2.19
VAPAQ9P0L0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.36□□□□□ -2.19
VAPAQ9P0L0 MIR4509-3-201ENST00000578671 94 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 MIR3118-1-201ENST00000581787 76 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 MIR4509-2-201ENST00000583920 94 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 MIR548AC-201ENST00000585049 88 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 MIR4509-1-201ENST00000618224 94 ntBASIC1.36□□□□□ -2.19
VAPAQ9P0L0 AL607023.1-201ENST00000620045 248 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms