Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 RNA5SP68-201ENST00000363885 119 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 RNA5SP456-201ENST00000364002 114 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 RNU6-259P-201ENST00000383999 107 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 MIR186-201ENST00000384988 86 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 RNU2-23P-201ENST00000410545 195 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 RNU2-16P-201ENST00000410712 136 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 RNU6-1245P-201ENST00000411130 106 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 BTF3L4P1-201ENST00000413813 468 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 AL161788.1-201ENST00000441805 169 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 AC124916.1-201ENST00000444020 547 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 DYNLL1P5-201ENST00000467158 270 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 MTCO3P9-201ENST00000506989 781 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 MTCYBP40-201ENST00000509390 1135 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 RN7SKP24-201ENST00000515888 284 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 HIF1AP1-201ENST00000553642 175 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 AL355297.2-201ENST00000604792 129 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 U2.17-201ENST00000611454 95 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 AC092608.2-201ENST00000624427 218 ntBASIC2.78□□□□□ -1.96
BLOC1S4Q9NUP1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-527P-201ENST00000363425 104 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 SNORA25.6-201ENST00000364121 118 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 RPS4XP7-201ENST00000406274 780 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AL096701.2-201ENST00000416920 238 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AC016691.1-201ENST00000441321 413 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AP001025.1-201ENST00000486139 332 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 TBCAP3-201ENST00000512475 312 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 RNU2-53P-201ENST00000516257 147 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 RNA5SP148-201ENST00000516527 94 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AC023050.3-201ENST00000541142 333 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 MTND1P15-201ENST00000579262 949 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 RPL30P11-203ENST00000598995 310 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 MIR6817-201ENST00000615588 66 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AC009233.1-201ENST00000616477 371 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AL354950.2-201ENST00000617939 290 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 U4.7-201ENST00000638126 106 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 AC069528.2-201ENST00000624849 1991 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 MTND5P26-201ENST00000426018 1752 ntBASIC2.77□□□□□ -1.97
BLOC1S4Q9NUP1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 AC092447.7-201ENST00000422212 1621 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-655P-201ENST00000362858 107 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 SNORD56.1-201ENST00000362913 68 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-1322P-201ENST00000364309 107 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 U3.12-201ENST00000364498 214 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 Y_RNA.255-201ENST00000364581 97 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 RNU1-52P-201ENST00000384190 164 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 MIR196B-201ENST00000384852 84 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 SNORA16.2-201ENST00000390991 127 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 AL591416.1-201ENST00000404015 867 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 RN7SKP158-201ENST00000410453 326 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 AC009963.1-201ENST00000417265 157 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 TIMM9P3-201ENST00000428659 274 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 AC073415.1-201ENST00000449240 153 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 AL139109.1-201ENST00000455491 297 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 RNU7-167P-201ENST00000459160 62 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 snoU13.14-201ENST00000459372 104 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-377P-201ENST00000515965 102 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 MTND4P7-201ENST00000523876 130 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 AP001893.2-201ENST00000526949 202 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 AP001330.5-201ENST00000607176 411 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 Z99129.1-201ENST00000612510 255 ntBASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
BLOC1S4Q9NUP1 Z82209.1-201ENST00000422141 2135 ntBASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 MIR95-201ENST00000385072 81 ntBASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 MIR524-201ENST00000385242 87 ntBASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 AL162578.1-201ENST00000406202 378 ntBASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 RNU2-66P-201ENST00000410650 161 ntBASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 AC010975.2-201ENST00000427781 588 ntBASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-261P-201ENST00000459506 102 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms