Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 AC010620.1-201ENST00000601088 1102 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 AL160281.1-201ENST00000605307 311 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 AC009509.4-201ENST00000619202 509 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 Z69720.2-201ENST00000624755 279 ntBASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.22□□□□□ -2.05
ZCCHC3Q9NUD5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-529P-201ENST00000363383 104 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 Y_RNA.324-201ENST00000365165 102 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 RNU5E-7P-201ENST00000365290 117 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 SNORD116-9-201ENST00000384000 95 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-1103P-201ENST00000384150 107 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 SNORD116-3-201ENST00000384287 95 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 SNORD116-7-201ENST00000384404 95 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 SNORD116-5-201ENST00000384462 95 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 RN7SKP158-201ENST00000410453 326 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 RNU2-23P-201ENST00000410545 195 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AC234781.5-201ENST00000508429 271 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 RNA5SP24-201ENST00000516478 95 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 SNORA48.11-201ENST00000517015 89 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AP005435.4-201ENST00000529514 284 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 CYCSP26-201ENST00000534107 320 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AC121758.2-201ENST00000553271 193 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AL138976.2-201ENST00000563989 694 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 RSL24D1P11-201ENST00000591045 491 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AC073648.5-201ENST00000603502 305 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AC103810.6-201ENST00000606708 136 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AP001596.2-201ENST00000608410 312 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AC022418.1-201ENST00000624118 445 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AC005609.4-201ENST00000625071 447 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AC090582.1-201ENST00000636321 199 ntBASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
ZCCHC3Q9NUD5 AC016717.2-201ENST00000609089 5141 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 SNORD56.1-201ENST00000362913 68 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-1303P-201ENST00000364841 107 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-1127P-201ENST00000384580 107 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 RPS4XP8-201ENST00000402039 771 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 RNU2-29P-201ENST00000410423 189 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 CDK8P2-201ENST00000415020 547 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AL360221.1-201ENST00000445989 335 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 snoU13.14-201ENST00000459372 104 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 MTCO3P7-201ENST00000510008 774 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AC079140.3-201ENST00000511111 550 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 RN7SKP298-201ENST00000515950 94 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 SNORA31.11-201ENST00000516528 139 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 RN7SKP219-201ENST00000516825 296 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AC118273.2-201ENST00000532092 465 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AC093249.1-201ENST00000567049 203 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AC006362.1-201ENST00000567392 174 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AC006023.1-201ENST00000603944 259 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AC008536.2-201ENST00000607284 349 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AL137847.3-201ENST00000611521 109 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AC008121.3-201ENST00000618726 433 ntBASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
ZCCHC3Q9NUD5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 Y_RNA.40-201ENST00000362645 93 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-1032P-201ENST00000384100 107 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-393P-201ENST00000384475 107 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 AC009238.1-201ENST00000442165 424 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 AC009237.6-201ENST00000446969 424 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 AL121594.1-201ENST00000475906 575 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 AC079382.1-201ENST00000493346 557 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 AC010493.1-201ENST00000513479 292 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 RNU2-69P-201ENST00000516061 100 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 RNA5SP402-201ENST00000517148 110 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 AC087241.2-201ENST00000535801 324 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 IMMP1LP2-201ENST00000552954 492 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 MTCO3P23-201ENST00000561363 289 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms