Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AC006512.1-201ENST00000468816 291 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AP001025.1-201ENST00000486139 332 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC140059.1-201ENST00000489238 361 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC079382.1-201ENST00000493346 557 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC092436.1-201ENST00000506450 503 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC079140.3-201ENST00000511111 550 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC074344.1-201ENST00000512823 224 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 RNU1-40P-201ENST00000516816 164 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 RNU1-97P-201ENST00000516872 164 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 SNORA31.23-201ENST00000517219 133 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC109329.1-201ENST00000518744 317 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC006362.1-201ENST00000567392 174 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 RPL12P50-201ENST00000603116 116 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC073410.2-201ENST00000603240 332 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 MIR5739-201ENST00000619803 80 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AP000553.5-201ENST00000641933 54 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 ZNF680P1-201ENST00000436625 1469 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 RNU6-78P-201ENST00000362897 107 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 Y_RNA.159-201ENST00000363674 87 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 RNA5SP160-201ENST00000364866 120 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 SNORA48.3-201ENST00000391081 134 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 BTF3P7-201ENST00000407097 488 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AL118520.1-201ENST00000450770 291 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AL356010.1-201ENST00000456364 102 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 CYP2C59P-201ENST00000457790 269 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AP000852.1-201ENST00000472460 573 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 CKS1BP2-201ENST00000497342 240 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 MTCO3P9-201ENST00000506989 781 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AC010493.1-201ENST00000513479 292 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 RNA5SP200-201ENST00000516360 103 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 BNIP3P6-201ENST00000549284 499 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AC090897.2-201ENST00000581715 130 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AC078795.2-201ENST00000602835 1252 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AL713866.2-201ENST00000603579 219 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 RN7SKP299-201ENST00000606679 301 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AC008536.2-201ENST00000607284 349 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AP001596.2-201ENST00000608410 312 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 RMST_7.1-201ENST00000621935 268 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 MIR6132-201ENST00000622083 109 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 AP003400.5-201ENST00000624827 617 ntBASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.77□□□□□ -2.13
CCL28Q9NRJ3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AL139276.1-201ENST00000311910 1001 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 SNORA67.1-201ENST00000364749 141 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 RNU5E-7P-201ENST00000365290 117 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 RNA5SP240-201ENST00000365355 128 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 Y_RNA.359-201ENST00000365498 102 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 RNU6-1103P-201ENST00000384150 107 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 SNORD116-1-201ENST00000384335 95 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 SNORA51.11-201ENST00000384442 131 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 MIR95-201ENST00000385072 81 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC074117.2-201ENST00000417130 397 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC008267.5-201ENST00000424928 265 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC073464.1-201ENST00000429823 534 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AL139109.1-201ENST00000455491 297 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC025033.1-201ENST00000463883 194 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 RPL23AP49-201ENST00000492925 468 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC105417.1-201ENST00000514691 285 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 LRRC34P2-201ENST00000514850 553 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AP005435.4-201ENST00000529514 284 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC002984.1-201ENST00000591692 448 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 SNORD14A-201ENST00000606526 91 ntBASIC1.76□□□□□ -2.13
CCL28Q9NRJ3 AL031601.2-202ENST00000622650 282 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms