Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SNORA31.16-201ENST00000516773 139 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-586P-201ENST00000517265 104 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 AC021451.1-201ENST00000523498 1129 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 OR5B19P-201ENST00000531766 928 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 CR383656.8-201ENST00000549046 145 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 AL160236.1-201ENST00000556317 195 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 AL157871.3-201ENST00000557231 293 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 AL133153.1-201ENST00000557756 303 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 AC098614.4-201ENST00000607601 462 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 MIR6779-201ENST00000617283 64 ntBASIC0.82□□□□□ -2.28
KIAA1549Q9HCM3 HSBP1P2-201ENST00000299671 229 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AL589826.1-201ENST00000340697 249 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-236P-201ENST00000363886 106 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 Y_RNA.408-201ENST00000383987 102 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 RNU2-48P-201ENST00000410694 191 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC068533.2-201ENST00000411872 306 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 USP9YP21-201ENST00000420603 432 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC114981.1-201ENST00000503897 678 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 PTP4A1P4-201ENST00000512479 322 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-334P-201ENST00000517072 102 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC022616.8-201ENST00000533569 253 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC079598.5-201ENST00000547460 117 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 SUB1P4-201ENST00000566062 339 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC104072.1-201ENST00000568817 668 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 RPL30P11-203ENST00000598995 310 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 RPL21P136-201ENST00000605378 396 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 TUG1_2.1-201ENST00000614234 87 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 RNU1-23P-201ENST00000363361 144 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 snoZ40.1-201ENST00000364540 72 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 RNU1-133P-201ENST00000364867 167 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-744P-201ENST00000365557 107 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-1316P-201ENST00000384242 108 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 MIR613-201ENST00000385248 95 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 RNU1-78P-201ENST00000391248 165 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 RPL21P90-201ENST00000415692 466 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC009518.2-201ENST00000418056 731 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 RPL39P29-201ENST00000447779 157 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 SNRPFP3-201ENST00000457792 225 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-333P-201ENST00000459117 107 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 SNORA31.19-201ENST00000517079 126 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 DEFB108A-201ENST00000530110 222 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AL078603.1-201ENST00000603824 313 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AL354696.1-201ENST00000614652 497 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC007792.1-201ENST00000623023 402 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC093875.1-201ENST00000623688 504 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC112204.3-201ENST00000623822 332 ntBASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.81□□□□□ -2.28
KIAA1549Q9HCM3 DDX43P2-201ENST00000604753 1354 ntBASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 ICE2P2-201ENST00000483823 2787 ntBASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-1284P-201ENST00000363701 100 ntBASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-414P-201ENST00000363705 104 ntBASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-944P-201ENST00000364023 107 ntBASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-611P-201ENST00000384276 104 ntBASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AC008267.5-201ENST00000424928 265 ntBASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 SNRPEP7-201ENST00000438350 220 ntBASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 KATNBL1P3-201ENST00000443475 909 ntBASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 SNORA31.17-201ENST00000516953 127 ntBASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AC073544.2-201ENST00000601155 540 ntBASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 NDUFA8P1-201ENST00000605525 367 ntBASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.8□□□□□ -2.28
KIAA1549Q9HCM3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 SNORD1A-201ENST00000364968 72 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 RNU6-166P-201ENST00000384371 107 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 BTF3L4P2-201ENST00000392798 346 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AL603865.2-201ENST00000401679 213 ntBASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.79□□□□□ -2.28
KIAA1549Q9HCM3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms